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histoneHMM: Differential analysis of histone modifications with broad genomic footprints., , , , , , , , and . BMC Bioinformatics, (2015)MeDIP-HMM: genome-wide identification of distinct DNA methylation states from high-density tiling arrays., , , , , and . Bioinformatics, 28 (22): 2930-2939 (2012)Comparing genome-wide chromatin profiles using ChIP-chip or ChIP-seq., , , , , , , , , and . Bioinformatics, 26 (8): 1000-1006 (2010)Computational tools for plant small RNA detection and categorization., and . Briefings in Bioinformatics, 20 (4): 1181-1192 (2019)Kraftwerk2 - A Fast Force-Directed Quadratic Placement Approach Using an Accurate Net Model., , and . IEEE Trans. on CAD of Integrated Circuits and Systems, 27 (8): 1398-1411 (2008)Performance-Directed Retiming for FPGAs Using Post-Placement Delay Information., , and . DATE, page 10770-10777. IEEE Computer Society, (2003)GORDIAN: VLSI placement by quadratic programming and slicing optimization., , , and . IEEE Trans. on CAD of Integrated Circuits and Systems, 10 (3): 356-365 (1991)Iterative placement improvement by network flow methods., , and . IEEE Trans. on CAD of Integrated Circuits and Systems, 13 (10): 1189-1200 (1994)Temperature-aware global placement., and . ASP-DAC, page 143-148. IEEE Computer Society, (2004)On the relative placement and the transportation problem for standard-cell layout., , and . DAC, page 308-313. IEEE Computer Society Press, (1986)