Abstract Evolution turned aquaporins (AQPs) into the most efficient facilitators of passive water flow through cell membranes at no expense of solute discrimination. In spite of a plethora of solved AQP structures, many structural details remain hidden. Here, by combining extensive sequence- and structural-based analysis of a unique set of 20 non-redundant high-resolution structures and molecular dynamics simulations of four representatives, key aspects of AQP stability, gating, selectivity, pore geometry, and oligomerization, with a potential impact on channel functionality, are identified. The general view of AQPs possessing a continuous open water pore is challenged and it is depicted that AQPs’ selectivity is not exclusively shaped by pore-lining residues but also by the relative arrangement of transmembrane helices. Moreover, this analysis reveals that hydrophobic interactions constitute the main determinant of protein thermal stability. Finally, a numbering scheme of the conserved AQP scaffold is established, facilitating direct comparison of, for example, disease-causing mutations and prediction of potential structural consequences. Additionally, the results pave the way for the design of optimized AQP water channels to be utilized in biotechnological applications.
%0 Journal Article
%1 https://doi.org/10.1002/smll.202202056
%A Gössweiner-Mohr, Nikolaus
%A Siligan, Christine
%A Pluhackova, Kristyna
%A Umlandt, Linnea
%A Koefler, Sabina
%A Trajkovska, Natasha
%A Horner, Andreas
%D 2022
%J Small
%K EXC2075 PN3 PN3-11 curated
%N 31
%P 2202056
%R https://doi.org/10.1002/smll.202202056
%T The Hidden Intricacies of Aquaporins: Remarkable Details in a Common Structural Scaffold
%U https://onlinelibrary.wiley.com/doi/abs/10.1002/smll.202202056
%V 18
%X Abstract Evolution turned aquaporins (AQPs) into the most efficient facilitators of passive water flow through cell membranes at no expense of solute discrimination. In spite of a plethora of solved AQP structures, many structural details remain hidden. Here, by combining extensive sequence- and structural-based analysis of a unique set of 20 non-redundant high-resolution structures and molecular dynamics simulations of four representatives, key aspects of AQP stability, gating, selectivity, pore geometry, and oligomerization, with a potential impact on channel functionality, are identified. The general view of AQPs possessing a continuous open water pore is challenged and it is depicted that AQPs’ selectivity is not exclusively shaped by pore-lining residues but also by the relative arrangement of transmembrane helices. Moreover, this analysis reveals that hydrophobic interactions constitute the main determinant of protein thermal stability. Finally, a numbering scheme of the conserved AQP scaffold is established, facilitating direct comparison of, for example, disease-causing mutations and prediction of potential structural consequences. Additionally, the results pave the way for the design of optimized AQP water channels to be utilized in biotechnological applications.
@article{https://doi.org/10.1002/smll.202202056,
abstract = {Abstract Evolution turned aquaporins (AQPs) into the most efficient facilitators of passive water flow through cell membranes at no expense of solute discrimination. In spite of a plethora of solved AQP structures, many structural details remain hidden. Here, by combining extensive sequence- and structural-based analysis of a unique set of 20 non-redundant high-resolution structures and molecular dynamics simulations of four representatives, key aspects of AQP stability, gating, selectivity, pore geometry, and oligomerization, with a potential impact on channel functionality, are identified. The general view of AQPs possessing a continuous open water pore is challenged and it is depicted that AQPs’ selectivity is not exclusively shaped by pore-lining residues but also by the relative arrangement of transmembrane helices. Moreover, this analysis reveals that hydrophobic interactions constitute the main determinant of protein thermal stability. Finally, a numbering scheme of the conserved AQP scaffold is established, facilitating direct comparison of, for example, disease-causing mutations and prediction of potential structural consequences. Additionally, the results pave the way for the design of optimized AQP water channels to be utilized in biotechnological applications.},
added-at = {2022-11-23T20:49:12.000+0100},
author = {Gössweiner-Mohr, Nikolaus and Siligan, Christine and Pluhackova, Kristyna and Umlandt, Linnea and Koefler, Sabina and Trajkovska, Natasha and Horner, Andreas},
biburl = {https://puma.ub.uni-stuttgart.de/bibtex/204782e4a5b543c181a29ff0b8066bec5/simtech},
doi = {https://doi.org/10.1002/smll.202202056},
eprint = {https://onlinelibrary.wiley.com/doi/pdf/10.1002/smll.202202056},
interhash = {a5066fa69245849b8d16b193902ad4a6},
intrahash = {04782e4a5b543c181a29ff0b8066bec5},
journal = {Small},
keywords = {EXC2075 PN3 PN3-11 curated},
number = 31,
pages = 2202056,
timestamp = {2023-12-06T08:55:18.000+0100},
title = {The Hidden Intricacies of Aquaporins: Remarkable Details in a Common Structural Scaffold},
url = {https://onlinelibrary.wiley.com/doi/abs/10.1002/smll.202202056},
volume = 18,
year = 2022
}