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Understanding False Positives in Reporter Gene Assays: in Silico Chemogenomics Approaches To Prioritize Cell-Based HTS Data.

T. Crisman, C. Parker, J. Jenkins, J. Scheiber, M. Thoma, Z. Kang, R. Kim, A. Bender, J. Nettles, J. Davies, und M. Glick. Journal of Chemical Information and Modeling, 47 (4): 1319-1327 (2007)

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Jeremy Nuzzo University of Stuttgart

L. Ahlgrimm

Christopher Jenkins University of Stuttgart

Lambert Theisen University of Stuttgart

Annika Liebgott

Automated reference-free assessment of MR image quality using an active learning approach: Comparison of Support Vector Machine versus Deep Neural Network classificationS. Gatidis, A. Liebgott, M. Schwartz, P. Martirosian, F. Schick, K. Nikolaou, B. Yang, und T. Küstner. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, Hawaii, USA, (April 2017)

Automated reference-free assessment of MR image quality using an active learning approach: Comparison of Support Vector Machine versus Deep Neural Network classificationS. Gatidis, A. Liebgott, M. Schwartz, P. Martirosian, F. Schick, K. Nikolaou, B. Yang, und T. Küstner. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, Hawaii, USA, (April 2017)An easy-to-use image labeling platform for automatic Magnetic Resonance Image Quality AssessmentT. Küstner, P. Wolf, M. Schwartz, A. Liebgott, F. Schick, S. Gatidis, und B. Yang. Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI), Melbourne, Australia, (April 2017)Automated image quality assessment in whole-body MRIS. Gatidis, A. Liebgott, H. Schmidt, N. Schwenzer, P. Martirosian, K. Nikolaou, F. Schick, B. Yang, und T. Küstner. Proceedings of the Radiological Society of North America (RSNA), Chicago, USA, (November 2016)

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"Bayes Affinity Fingerprints" Improve Retrieval Rates in Virtual Screening and Define Orthogonal Bioactivity Space: When Are Multitarget Drugs a Feasible Concept?A. Bender, J. Jenkins, M. Glick, Z. Deng, J. Nettles, und J. Davies. Journal of Chemical Information and Modeling, 46 (6): 2445-2456 (2006)Understanding False Positives in Reporter Gene Assays: in Silico Chemogenomics Approaches To Prioritize Cell-Based HTS Data.T. Crisman, C. Parker, J. Jenkins, J. Scheiber, M. Thoma, Z. Kang, R. Kim, A. Bender, J. Nettles, J. Davies und 1 andere Autor(en). Journal of Chemical Information and Modeling, 47 (4): 1319-1327 (2007)Determination of minimal transcriptional signatures of compounds for target prediction.F. Nigsch, J. Hutz, B. Cornett, D. Selinger, G. McAllister, S. Bandyopadhyay, J. Loureiro, und J. Jenkins. EURASIP J. Bioinformatics and Systems Biology, (2012)Using Information from Historical High-Throughput Screens to Predict Active Compounds.S. Riniker, Y. Wang, J. Jenkins, und G. Landrum. Journal of Chemical Information and Modeling, 54 (7): 1880-1891 (2014)Enrichment of High-Throughput Screening Data with Increasing Levels of Noise Using Support Vector Machines, Recursive Partitioning, and Laplacian-Modified Naive Bayesian Classifiers.M. Glick, J. Jenkins, J. Nettles, H. Hitchings, und J. Davies. Journal of Chemical Information and Modeling, 46 (1): 193-200 (2006)Clustering and Rule-Based Classifications of Chemical Structures Evaluated in the Biological Activity Space.A. Schuffenhauer, N. Brown, P. Ertl, J. Jenkins, P. Selzer, und J. Hamon. Journal of Chemical Information and Modeling, 47 (2): 325-336 (2007)How Similar Are Similarity Searching Methods? A Principal Component Analysis of Molecular Descriptor Space.A. Bender, J. Jenkins, J. Scheiber, S. Sukuru, M. Glick, und J. Davies. Journal of Chemical Information and Modeling, 49 (1): 108-119 (2009)SPREAD - exploiting chemical features that cause differential activity behavior.J. Scheiber, J. Jenkins, A. Bender, M. Milik, D. Mikhailov, S. Sukuru, B. Cornett, S. Whitebread, L. Urban, J. Davies und 1 andere Autor(en). Statistical Analysis and Data Mining, 2 (2): 115-122 (2009)Prediction of Biological Targets for Compounds Using Multiple-Category Bayesian Models Trained on Chemogenomics Databases.Nidhi, M. Glick, J. Davies, und J. Jenkins. Journal of Chemical Information and Modeling, 46 (3): 1124-1133 (2006)Gaining Insight into Off-Target Mediated Effects of Drug Candidates with a Comprehensive Systems Chemical Biology Analysis.J. Scheiber, B. Chen, M. Milik, S. Sukuru, A. Bender, D. Mikhailov, S. Whitebread, J. Hamon, K. Azzaoui, L. Urban und 3 andere Autor(en). Journal of Chemical Information and Modeling, 49 (2): 308-317 (2009)