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TwoPaCo: An efficient algorithm to build the compacted de Bruijn graph from many complete genomes.

, , and . CoRR, (2016)

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The plane-width of graphs., , and . Journal of Graph Theory, 68 (3): 229-245 (2011)Complexity of independent set reconfigurability problems., , and . Theor. Comput. Sci., (2012)RecoverY: k-mer-based read classification for Y-chromosome-specific sequencing and assembly., , , , , , and . Bioinformatics, 34 (7): 1125-1131 (2018)Compacting de Bruijn graphs from sequencing data quickly and in low memory., , and . Bioinformatics, 32 (12): 201-208 (2016)Toward fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics., and . Bioinformatics, 35 (3): 415-420 (2019)Data structures to represent sets of k-long DNA sequences., , and . CoRR, (2019)TwoPaCo: An efficient algorithm to build the compacted de Bruijn graph from many complete genomes., , and . CoRR, (2016)Using state machines to model the Ion Torrent sequencing process and to improve read error rates., and . Bioinformatics, 29 (13): 344-351 (2013)Paired de Bruijn Graphs: A Novel Approach for Incorporating Mate Pair Information into Genome Assemblers., , , , and . RECOMB, volume 6577 of Lecture Notes in Computer Science, page 238-251. Springer, (2011)Ab Initio Whole Genome Shotgun Assembly with Mated Short Reads., and . RECOMB, volume 4955 of Lecture Notes in Computer Science, page 50-64. Springer, (2008)