Publications

Zum Wandel in den Wissenschaften durch datenintensive Forschung. In Wissenschaftsrat (Eds.), October 2020. [PUMA: forschungsdaten digitalisierung positionspapier politik] URL

W. B. Frakes, and Kyo Kang. Why SPI Initiative Failed: Contextual Factors and Changing Software Development Environment. System Sciences (HICSS) 2013 46th Hawaii International Conference, 4606-4615, 2005. [PUMA: reuse software]

Sean Bechhofer, Iain Buchan, David de Roure, Paolo Missier, John Ainsworth, Jiten Bhagat, Philip Couch, Don Cruickshank, Mark Delderfield, Ian Dunlop, Matthew Gamble, Danius Michaelides, Stuart Owen, David Newman, Shoaib Sufi, and Carole Goble. Why linked data is not enough for scientists. Future Generation Computer Systems, (29)2:599-611, 2013. [PUMA: forschungsdaten metadata] URL

B. de Alwis, and J. Sillito. Why are software projects moving from centralized to decentralized version control systems?. 2009 ICSE Workshop on Cooperative and Human Aspects on Software Engineering, 36-39, May 2009. [PUMA: software versionierung] URL

Heather A. Piwowar. Who Shares? Who Doesn't? Factors Associated with Openly Archiving Raw Research Data. PloS one, 2011. [PUMA: forschungsdaten motivation]

Nicola Guarino, Daniel Oberle, and Steffen Staab. What Is an Ontology?. In Steffen Staab, and Rudi Studer (Eds.), Handbook on Ontologies, 1--17, Springer Berlin Heidelberg, Berlin, Heidelberg, 2009. [PUMA: metadata ontologie] URL

Shea Swauger, and Todd J. Vision. What Factors Influence Where Researchers Deposit their Data? A Survey of Researchers Submitting to Data Repositories.. (10)12015. [PUMA: forschungsdaten motivation befragung repository] URL

Benedikt Fecher, Sascha Friesike, and Marcel Hebing. What Drives Academic Data Sharing?. PLOS ONE, (10)2:1-25, Public Library of Science, February 2015. [PUMA: forschungsdaten motivation] URL

Jörg Desel, Dorothea Tippe, Ralf Klinkenberg, Stefan Rüping, Andreas Fick, Nicola Henze, and Christian Herzog. Vorteile von computergestütztem Lernen in Gruppen aus Sicht der Pädagogischen Psychologie. Universität Eichstätt, 2001. [PUMA: myown]

Jens Dierkes, and Constanze Curdt. Von der Idee zum Konzept – Forschungsdatenmanagement an der Universität zu Köln. o-bib. Das offene Bibliotheksjournal / Herausgeber VDB, (5)2:28-46, 2018. [PUMA: forschungsdaten aufbau litPHBFD] URL

W. Humphrey, A. Dalke, and K. Shulten. VMD: visual molecular dynamics. J Mol Graph, (14)1996. [PUMA: imported molecularSimulation] URL

Andreas Schreiber, and Regina Struminski. Visualizing the Provenance of Personal Data Using Comics. Computers, (7)1MDPI, February 2018. [PUMA: provenance metadata visualization comics] URL

Andreas Schreiber, and Regina Struminski. Visualizing Provenance using Comics. In Adam Bates, and Bill Howe (Eds.), Proceedings of the 9th USENIX Workshop on the Theory and Practice of Provenance (TaPP 2017), USENIX Association, June 2017. [PUMA: provenance metadata visualization comics] URL

Khalid Belhajjame, Jun Zhao, Daniel Garijo, Matthew Gamble, Kristina Hettne, Raul Palma, Eleni Mina, Oscar Corcho, José Manuel Gómez-Pérez, Sean Bechhofer, Graham Klyne, and Carole Goble. Using a suite of ontologies for preserving workflow-centric research objects. Journal of Web Semantics, (32):16 - 42, 2015. [PUMA: forschungsdaten metadata useCases researchObjects] URL

Khalid Belhajjame, Jun Zhao, Daniel Garijo, Matthew Gable, Kristina Hettne, Raul Palma, Eleni Mina, Oscar Corcho, José Manuel Gómez-Pérez, Sean Bechofer, Graham Klyne, and Carole Goble. Using a suite of ontologies for preserving workflow-centric research objects. Web Semantics: Science, Services and Agents on the World Wide Web, (32):16-42, May 2015. [PUMA: forschungsdaten metadata researchObjects] URL

Felicitas Kleinkopf, Janina Jacke, and Markus Gärtner. Urheberrechtliche Grenzen der Nachnutzung wissenschaftlicher Korpora bei computergestützten Verfahren und digitalen Ressourcen. 2021. [PUMA: forschungsdaten Korpora TextDataMining rechtlicheFragestellungen]

Till Kreutzer, and Georg Fischer. Urheberrecht in der Wissenschaft. Ein Überblick für Forschung, Lehre und Bibliotheken. Zenodo, August 2023. [PUMA: forschungsdaten Urheberrecht rechtlicheFragestellungen] URL

Alison Spence, Valerie McCutcheon, and Mary Donaldson. University of Glasgow Electronic Research Notebook Case Study. University of Glasgow, Glasgow, July 2020. [PUMA: forschungsdaten elektronischesLaborbuch] URL

UNESCO Recommendation on Open Science. In UNESCO (Eds.), 2021. [PUMA: openScience forschungsdaten positionspapier openaccess politik] URL

Devan Ray Donaldson, Shawn Martin, and Thomas Proffen. Understanding Perspectives on Sharing Neutron Data at Oak Ridge National Laboratory. Data Science Journal, (16):35, 2017. [PUMA: forschungsdaten physik motivation befragung] URL

Paul N Edwards, Steven J Jackson, Geoffrey C Bowker, and Cory Philip Knobel. Understanding infrastructure: Dynamics, tensions, and design. 2007. [PUMA: infrastructure it]

Dorothea Iglezakis. Und noch einer.... DaRUS, Universität Stuttgart, 2019. [PUMA: darus unbearbeitet] URL

Bernd Flemisch, Sibylle Hermann, Christian Holm, Miriam Mehl, Guido Reina, Benjamin Uekermann, David Boehringer, Thomas Ertl, Jean-Noël Grad, Dorothea Iglezakis, Alexander Jaust, Timo Koch, Anett Seeland, Rudolf Weeber, Florian Weik, and Kilian Weishaupt. Umgang mit Forschungssoftware an der Universität Stuttgart. Universität Stuttgart, 2020. [PUMA: myown forschungsdaten software] URL

Gerald Wolfgang Jagusch, and Nils Preuß. Umfragedaten zu "NFDI4Ing - Rückmeldung aus den Forschungscommunities". 2019. [PUMA: forschungsdaten survey engineering] URL

Charles Meneveau, and Ivan Marusic. Turbulence in the Era of Big Data: Recent Experiences with Sharing Large Datasets. In Andrew Pollard, Luciano Castillo, Luminita Danaila, and Mark Glauser (Eds.), Whither turbulence and big data in the 21st century?, 497-507, Springer, Switzerland, 2017. [PUMA: bigdata forschungsdaten obib engineering iag]

Lucas N. Joppa, Greg McInerny, Richard Harper, Lara Salido, Kenji Takeda, Kenton O’Hara, David Gavaghan, and Stephen Emmott. Troubling Trends in Scientific Software Use. Science, (340)6134:814--815, American Association for the Advancement of Science, 2013. [PUMA: forschungsdaten software] URL

Dominika Dolzycka, Katarzyna Biernacka, Kerstin Helbig, and Petra Buchholz. Train-the-Trainer Konzept zum Thema Forschungsdatenmanagement. Zenodo, March 2019. [PUMA: forschungsdaten training] URL

João Felipe Pimentel, Juliana Freire, Vanessa Braganholo, and Leonardo Murta. Tracking and Analyzing the Evolution of Provenance from Scripts. In Marta Mattoso, and Boris Glavic (Eds.), Provenance and Annotation of Data and Processes, 16--28, Springer International Publishing, Cham, 2016. [PUMA: forschungsdaten provenance metadata tracking]

Andreas Schreiber, and Regina Struminski. Tracing personal data using comics. Universal Access in Human--Computer Interaction. Design and Development Approaches and Methods: 11th International Conference, UAHCI 2017, Held as Part of HCI International 2017, Vancouver, BC, Canada, July 9--14, 2017, Proceedings, Part I 11, 444--455, 2017. [PUMA: forschungsdaten provenance metadata comics]

Anna-Lena Lamprecht, Leyla Garcia, Mateusz Kuzak, Carlos Martinez, Ricardo Arcila, Eva Martin Del Pico, Victoria Dominguez Del Angel, Stephanie van de Sandt, Jon Ison, Paula Andrea Martinez, Peter McQuilton, Alfonso Valencia, Jennifer Harrow, Fotis Psomopoulos, Josep Ll. Gelpi, Neil Chue Hong, Carole Goble, and Salvador Capella-Gutierrez. Towards FAIR principles for~research~software. In Paul Groth (Eds.), Data Science, 1--23, IOS Press, November 2019. [PUMA: forschungsdaten fairPrinciples software] URL

Johannes Lipp, Lars Gleim, Michael Cochez, Iraklis Dimitriadis, Hussain Ali, Daniel Hoppe Alvarez, Christoph Lange, and Stefan Decker. Towards Easy Vocabulary Drafts with Neologism 2.0. ESWC2021 Poster and Demo Track, 2021. [PUMA: metadata ontologie tools] URL

Barbara A. Rasaiah, Chris Bellman, Simon D. Jones, Tim J. Malthus, and Chris M. Roelfsema. Towards an Interoperable Field Spectroscopy Metadata Standard with Extended Support for Marine Specific Applications.. Remote Sensing, (7)11:15668-15701, 2015. [PUMA: standard forschungsdaten metadata spectroscopy marine] URL

Matjaz Kljun, John Mariani, and Alan Dix. Toward Understanding Short-term Personal Information Preservation: A Study of Backup Strategies of End Users. J. Assoc. Inf. Sci. Technol., (67)12:2947--2963, John Wiley & Sons, Inc., New York, NY, USA, December 2016. [PUMA: backup forschungsdaten preservation] URL

Michael Felderer, Michael Goedicke, Lars Grunske, Wilhelm Hasselbring, Anna-Lena Lamprecht, and Bernhard Rumpe. Toward Research Software Engineering Research. Zenodo, 2023. [PUMA: forschungsdaten metadata software classification] URL

Victoria Stodden, Peixuan Guo, and Zhaokun Ma. Toward Reproducible Computational Research: An Empirical Analysis of Data and Code Policy Adoption by Journals. PLOS ONE, (8)6:1-8, Public Library of Science, June 2013. [PUMA: software reproducibility softwareLizenzMotivation journals] URL

Christopher Erdmann, Natasha Simons, Reid Otsuji, Stephanie Labou, Ryan Johnson, Guilherme Castelao, Bia Villas Boas, Anna-Lena Lamprecht, Carlos Martinez Ortiz, Leyla Garcia, Mateusz Kuzak, Paula Andrea Martinez, Liz Stokes, Tom Honeyman, Sharyn Wise, Josh Quan, Scott Peterson, Amy Neeser, Lena Karvovskaya, Otto Lange, Iza Witkowska, Jacques Flores, Fiona Bradley, Kristina Hettne, Peter Verhaar, Ben Companjen, Laurents Sesink, Fieke Schoots, Erik Schultes, Rajaram Kaliyaperumal, Erzsébet Tóth-Czifra, Ricardo de Miranda Azevedo, Sanne Muurling, John Brown, Janice Chan, Niamh Quigley, Lisa Federer, Douglas Joubert, Allissa Dillman, Kenneth Wilkins, Ishwar Chandramouliswaran, Vivek Navale, Susan Wright, Silvia Di Giorgio, Mandela Fasemore, Konrad Förstner, Till Sauerwein, Eva Seidlmayer, Ilja Zeitlin, Susannah Bacon, Katie Hannan, Richard Ferrers, Keith Russell, Deidre Whitmore, and Tim Dennis. Top 10 FAIR Data & Software Things. February 2019. [PUMA: forschungsdaten fairPrinciples schulung example] URL

Jörg Baz, Christoph Held, Jürgen Pleiss, and Niels Hansen. Thermophysical properties of glyceline-water mixtures investigated by molecular modelling. Physical Chemistry Chemical Physics, (21):6467 - 6476, 2019. [PUMA: dfgSimScience]

Bob Sharp. The use of computers in sports science.. British Journal of Educational Technology, (27)1:25-32, Blackwell Publishing Ltd, 1996. [PUMA: software softwareLizenzMotivation sportscience licensing research] URL

Pär Nyström, Terje Falck-Ytter, and Gustaf Gredebäck. The TimeStudio Project: An open source scientific workflow system for the behavioral and brain sciences. Behavior Research Methods, (48)2:542--552, Jun 1, 2016. [PUMA: software workflow scientific softwareLizenzMotivation repository] URL

Peter Murray-Rust, Joe Townsend, Sam E. Adams, Weerapong Phadungsukanan, and Jens Thomas. The semantics of Chemical Markup Language (CML): dictionaries and conventions.. J. Cheminformatics, (3):43, 2011. [PUMA: forschungsdaten metadata dfgSimScience chemistry] URL

Victoria Stodden. The Scientific Method in Practice: Reproducibility in the Computational Sciences. In MIT Sloan Research Paper No. 4773-10 (Eds.), MIT Sloan Research Paper No. 4773-10February 2010. [PUMA: forschungsdaten motivation software befragung]

Markus Hirsch, Dorothea Iglezakis, Frank Leymann, and Michael Zimmermann. The ReSUS Project - Infrastructure for Sharing Research Software. E-Science-Tage 2021: Share Your Research Data, 267-276, heiBOOKS, 2022. [PUMA: myown forschungsdaten metadata software tools repository] URL

Pierre Tremouilhac, Chia-Lin Lin, Pei-Chi Huang, Yu-Chieh Huang, An Nguyen, Nicole Jung, Felix Bach, Robert Ulrich, Bernhard Neumair, Achim Streit, and Stefan Bräse. The Repository Chemotion: Infrastructure for Sustainable Research in Chemistry. April 2020. [PUMA: chemie forschungsdaten tools repository] URL

Luc Moreau, Paul Groth, James Cheney, Timothy Lebo, and Simon Miles. The rationale of PROV. Web Semantics: Science, Services and Agents on the World Wide Web, (35)4:235-257, December 2015. [PUMA: forschungsdaten provenance metadata] URL

Angelina Kraft, Matthias Razum, Jan Potthoff, Andrea Porzel, Thomas Engel, Frank Lange, Karina van den Broek, and Filipe Furtado. The RADAR Project - A Service for Research Data Archival and Publication.. ISPRS Int. J. Geo-Information, (5)3:28, 2016. [PUMA: forschungsdaten repository] URL

Josh Brown, Phill Jones, Alice Meadows, and Fiona Murphy. The PID-optimised Research Lifecycle. Zenodo, 2021. [PUMA: forschungsdaten persistentIdentifier] URL

Michael Bar-Sinai, and Matthew Dunlap. The Open Monolith - Keeping Your Codebase (and Your Headaches) Small. In JavaOne (Eds.), 2017. [PUMA: forschungsdaten development software workflows dataverse repository]

Jens Krüger, Richard Grunzke, Sandra Gesing, Sebastian Breuers, André Brinkmann, Luis de la Garza, Oliver Kohlbacher, Martin Kruse, Wolfgang E. Nagel, Lars Packschies, Ralph Müller-Pfefferkorn, Patrick Schäfer, Charlotta Schärfe, Thomas Steinke, Tobias Schlemmer, Klaus Dieter Warzecha, Andreas Zink, and Sonja Herres-Pawlis. The MoSGrid Science Gateway – A Complete Solution for Molecular Simulations. Journal of Chemical Theory and Computation, (10)6:2232-2245, 2014. [PUMA: forschungsdaten obib engineering] URL

Richard Grunzke, Volker Hartmann, Thomas Jejkal, Helen Kollai, Ajinkya Prabhune, Hendrik Herold, Aline Deicke, Christiane Dressler, Julia Dolhoff, Julia Stanek, Alexander Hoffmann, Ralph Müller-Pfefferkorn, Torsten Schrade, Gotthard Meinel, Sonja Herres-Pawlis, and Wolfgang E. Nagel. The MASi repository service — Comprehensive, metadata-driven and multi-community research data management. Future Generation Computer Systems, (94):879 - 894, 2019. [PUMA: forschungsdaten metadata litPHBFD tools repository] URL

Björn Schembera, and Dorothea Iglezakis. The Genesis of EngMeta - A Metadata Model for Research Data in Computational Engineering. In Emmanouel Garoufallou, Fabio Sartori, Rania Siatri, and Marios Zervas (Eds.), Metadata and Semantic Research, 846:127-132, Springer International Publishing, Cham, 2019. [PUMA: myown forschungsdaten metadata project_dipling engineering]