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A Robust Framework for Rapid Deployment of a Virtual Screening Laboratory.

M. Shahid, M. Hofmann-Apitius, O. Wäldrich, and W. Ziegler. HealthGrid, volume 147 of Studies in Health Technology and Informatics, page 212-221. IOS Press, (2009)

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Gloria Hofmann University of Stuttgart

Dr. Lisa Hofmann University of Stuttgart

Philipp Hofmann University of Stuttgart

Dr. -Ing. Matthias Hofmann University of Stuttgart

Roman Hofmann University of Stuttgart

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Prior Art Search in Chemistry Patents Based On Semantic Concepts and Co-Citation Analysis.H. Gurulingappa, B. Müller, R. Klinger, H. Mevissen, M. Hofmann-Apitius, C. Friedrich, and J. Fluck. TREC, Special Publication 500-294, National Institute of Standards and Technology (NIST), (2010)Patent Retrieval in Chemistry based on semantically tagged Named EntitiesH. Gurulingappa, B. Müller, R. Klinger, H. Mevissen, M. Hofmann-Apitius, J. Fluck, and C. Friedrich. The Eighteenth Text RETrieval Conference (TREC 2009) Proceedings, Gaithersburg, Maryland, USA, (November 2009)Improving Distantly Supervised Extraction of Drug-Drug and Protein-Protein InteractionsT. Bobic, R. Klinger, P. Thomas, and M. Hofmann-Apitius. Proceedings of the Joint Workshop on Unsupervised and Semi-Supervised Learning in NLP, page 35-43. Avignon, France, Association for Computational Linguistics, (April 2012)A systematic approach for identifying shared mechanisms in epilepsy and its comorbidities.C. Hoyt, D. Domingo-Fernández, N. Balzer, A. Güldenpfennig, and M. Hofmann-Apitius. Database, (2018)A Semantic Platform for Information Retrieval from E-Health Records.H. Gurulingappa, B. Müller, M. Hofmann-Apitius, and J. Fluck. TREC, Special Publication 500-296, National Institute of Standards and Technology (NIST), (2011)Information Retrieval Framework for Technology Survey in Biomedical and Chemistry Literature.H. Gurulingappa, B. Müller, M. Hofmann-Apitius, and J. Fluck. TREC, Special Publication 500-296, National Institute of Standards and Technology (NIST), (2011)Quantifying mechanisms in neurodegenerative diseases (NDDs) using candidate mechanism perturbation amplitude (CMPA) algorithm.R. Karki, A. Kodamullil, C. Hoyt, and M. Hofmann-Apitius. BMC Bioinformatics, 20 (1): 494:1-494:8 (2019)'HypothesisFinder: ' A Strategy for the Detection of Speculative Statements in Scientific Text.A. Malhotra, E. Younesi, H. Gurulingappa, and M. Hofmann-Apitius. PLoS Computational Biology, (2013)Public microarray repository semantic annotation with ontologies employing text mining and expression profile correlation.D. Ruau, C. Kolárik, H. Mevissen, E. Müller, I. Assent, R. Krieger, T. Seidl, M. Hofmann-Apitius, and M. Zenke. BMC Bioinformatics, (2008)PLIO: an ontology for formal description of protein-ligand interactions.O. Ivchenko, E. Younesi, M. Shahid, A. Wolf, B. Müller, and M. Hofmann-Apitius. Bioinformatics, 27 (12): 1684-1690 (2011)