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A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana., , and . BMC Bioinformatics, (2007)Improving pan-genome annotation using whole genome multiple alignment., , , and . BMC Bioinformatics, (2011)The Terabase Search Engine: a large-scale relational database of short-read sequences., , , and . Bioinformatics, 35 (4): 665-670 (2019)Gene-Boosted Assembly of a Novel Bacterial Genome from Very Short Reads., , , and . PLoS Computational Biology, (2008)Efficient oligonucleotide probe selection for pan-genomic tiling arrays., , , and . BMC Bioinformatics, (2009)Bracken: estimating species abundance in metagenomics data., , , and . PeerJ Computer Science, (2017)Clustering metagenomic sequences with interpolated Markov models., and . BMC Bioinformatics, (2010)OperonDB: a comprehensive database of predicted operons in microbial genomes., , , and . Nucleic Acids Research, 37 (Database-Issue): 479-482 (2009)TopHat: discovering splice junctions with RNA-Seq., , and . Bioinformatics, 25 (9): 1105-1111 (2009)GAGE-B: an evaluation of genome assemblers for bacterial organisms., , , , , , , and . Bioinformatics, 29 (14): 1718-1725 (2013)