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SV-Bay: structural variant detection in cancer genomes using a Bayesian approach with correction for GC-content and read mappability., , , , and . Bioinformatics, 32 (7): 984-992 (2016)SVDetect: a tool to identify genomic structural variations from paired-end and mate-pair sequencing data., , , , , , , and . Bioinformatics, 26 (15): 1895-1896 (2010)Learning smoothing models of copy number profiles using breakpoint annotations., , , , , , , and . BMC Bioinformatics, (2013)Control-free calling of copy number alterations in deep-sequencing data using GC-content normalization., , , , , , and . Bioinformatics, 27 (2): 268-269 (2011)QuantumClone: clonal assessment of functional mutations in cancer based on a genotype-aware method for clonal reconstruction., , , , , , , , , and 8 other author(s). Bioinformatics, 34 (11): 1808-1816 (2018)SegAnnDB: interactive Web-based genomic segmentation., , , , , , , , , and 2 other author(s). Bioinformatics, 30 (11): 1539-1546 (2014)VAMP: Visualization and analysis of array-CGH, transcriptome and other molecular profiles., , , , , , , , , and 12 other author(s). Bioinformatics, 22 (17): 2066-2073 (2006)Control-FREEC: a tool for assessing copy number and allelic content using next-generation sequencing data., , , , , , , , and . Bioinformatics, 28 (3): 423-425 (2012)