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Phylogenetic Reconstruction from Complete Gene Orders of Whole Genomes., , , and . APBC, volume 6 of Advances in Bioinformatics and Computational Biology, page 241-250. Imperial College Press, (2008)Sorting Signed Permutations by Inversions in O(nlogn) Time., , , and . Journal of Computational Biology, 17 (3): 489-501 (2010)Models and algorithms for genome rearrangement with positional constraints., , and . Algorithms for Molecular Biology, (2016)Listing all sorting reversals in quadratic time., , and . Algorithms for Molecular Biology, (2011)Aligning the unalignable: bacteriophage whole genome alignments., , , , , and . BMC Bioinformatics, (2016)Maximum independent sets of commuting and noninterfering inversions., , , and . BMC Bioinformatics, (2009)Heuristics for the inversion median problem., , , , and . BMC Bioinformatics, 11 (S-1): 30 (2010)A graph-theoretic approach for inparalog detection., and . BMC Bioinformatics, 13 (S-19): S16 (2012)Estimating true evolutionary distances under rearrangements, duplications, and losses., , , and . BMC Bioinformatics, 11 (S-1): 54 (2010)On the Comparison of Sets of Alternative Transcripts., , and . ISBRA, volume 7292 of Lecture Notes in Computer Science, page 201-212. Springer, (2012)