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ChroCoLoc: an application for calculating the probability of co-localization of microarray gene expression., , , and . Bioinformatics, 22 (6): 765-767 (2006)The ArrayExpress gene expression database: a software engineering and implementation perspective., , , , , , , , , and 6 other author(s). Bioinformatics, 21 (8): 1495-1501 (2005)Gene Expression Atlas update - a value-added database of microarray and sequencing-based functional genomics experiments., , , , , , , , , and 12 other author(s). Nucleic Acids Research, 40 (Database-Issue): 1077-1081 (2012)A pipeline for RNA-seq data processing and quality assessment., , , and . Bioinformatics, 27 (6): 867-869 (2011)Modeling sample variables with an Experimental Factor Ontology., , , , , , , , and . Bioinformatics, 26 (8): 1112-1118 (2010)Developing an Ontology from the Application Up., , , , and . OWLED, volume 529 of CEUR Workshop Proceedings, CEUR-WS.org, (2009)Gene Expression Atlas at the European Bioinformatics Institute., , , , , , , , , and . Nucleic Acids Research, 38 (Database-Issue): 690-698 (2010)Expression Profiler: next generation - an online platform for analysis of microarray data., , , , , , , , , and 1 other author(s). Nucleic Acids Research, 32 (Web-Server-Issue): 465-470 (2004)ArrayExpress - a public database of microarray experiments and gene expression profiles., , , , , , , , , and 6 other author(s). Nucleic Acids Research, 35 (Database-Issue): 747-750 (2007)OntoCAT - simple ontology search and integration in Java, R and REST/JavaScript., , , , , , , , and . BMC Bioinformatics, (2011)