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A network-based approach for predicting key enzymes explaining metabolite abundance alterations in a disease phenotype., , , and . BMC Systems Biology, (2013)Do elementary flux modes combine linearly at the ätomic" level? Integrating tracer-based metabolomics data and elementary flux modes., , , , , and . Biosystems, 105 (2): 140-146 (2011)Direct calculation of elementary flux modes satisfying several biological constraints in genome-scale metabolic networks., and . Bioinformatics, 30 (15): 2197-2203 (2014)Integrating gene and protein expression data with genome-scale metabolic networks to infer functional pathways., , , , and . BMC Systems Biology, (2013)Advances in network-based metabolic pathway analysis and gene expression data integration., , , , , and . Briefings in Bioinformatics, 16 (2): 265-279 (2015)Direct calculation of minimal cut sets involving a specific reaction knock-out., , and . Bioinformatics, 32 (13): 2001-2007 (2016)Context-specific metabolic network reconstruction of a naphthalene-degrading bacterial community guided by metaproteomic data., , , , , , , , , and 3 other author(s). Bioinformatics, 31 (11): 1771-1779 (2015)Exploring metabolic pathways in genome-scale networks via generating flux modes., , , , , , , , and . Bioinformatics, 27 (4): 534-540 (2011)Joint analysis of miRNA and mRNA expression data., , , and . Briefings in Bioinformatics, 14 (3): 263-278 (2013)TreeEFM: calculating elementary flux modes using linear optimization in a tree-based algorithm., , , , , , and . Bioinformatics, 31 (6): 897-904 (2015)