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MaBoSS 2.0: an environment for stochastic Boolean modeling.

G. Stoll, B. Caron, E. Viara, A. Dugourd, A. Zinovyev, A. Naldi, G. Kroemer, E. Barillot, and L. Calzone. Bioinformatics, 33 (14): 2226-2228 (2017)

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Dynamically consistent reduction of logical regulatory graphs.A. Naldi, E. Remy, D. Thieffry, and C. Chaouiya. Theor. Comput. Sci., 412 (21): 2207-2218 (2011)Logical modelling of regulatory networks with GINsim 2.3.A. Naldi, D. Bérenguier, A. Fauré, F. Lopez, D. Thieffry, and C. Chaouiya. Biosystems, 97 (2): 134-139 (2009)Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle.A. Fauré, A. Naldi, C. Chaouiya, and D. Thieffry. ISMB (Supplement of Bioinformatics), page 124-131. (2006)A Reduction of Logical Regulatory Graphs Preserving Essential Dynamical Properties.A. Naldi, E. Remy, D. Thieffry, and C. Chaouiya. CMSB, volume 5688 of Lecture Notes in Computer Science, page 266-280. Springer, (2009)Symbolic Dynamics of Biochemical Pathways as Finite States Machines.O. Radulescu, S. Samal, A. Naldi, D. Grigoriev, and A. Weber. CMSB, volume 9308 of Lecture Notes in Computer Science, page 104-120. Springer, (2015)Cooperative development of logical modelling standards and tools with CoLoMoTo.A. Naldi, P. Monteiro, C. Müssel, H. Kestler, D. Thieffry, I. Xenarios, J. Saez-Rodriguez, T. Helikar, and C. Chaouiya. Bioinformatics, 31 (7): 1154-1159 (2015)SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools.C. Chaouiya, D. Bérenguier, S. Keating, A. Naldi, M. van Iersel, N. Rodriguez, A. Dräger, F. Büchel, T. Cokelaer, B. Kowal and 14 other author(s). BMC Systems Biology, (2013)Geometric analysis of pathways dynamics: Application to versatility of TGF-β receptors.S. Samal, A. Naldi, D. Grigoriev, A. Weber, N. Théret, and O. Radulescu. Biosystems, (2016)MaBoSS 2.0: an environment for stochastic Boolean modeling.G. Stoll, B. Caron, E. Viara, A. Dugourd, A. Zinovyev, A. Naldi, G. Kroemer, E. Barillot, and L. Calzone. Bioinformatics, 33 (14): 2226-2228 (2017)The Systems Biology Markup Language (SBML) Level 3 Package: Qualitative Models, Version 1, Release 1.C. Chaouiya, S. Keating, D. Bérenguier, A. Naldi, D. Thieffry, M. van Iersel, N. Novère, and T. Helikar. J. Integrative Bioinformatics, (2015)

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MaBoSS 2.0: an environment for stochastic Boolean modeling.

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copydeleteadd this publication to your clipboardcommunity posthistory of this postURLDOIBibTeXEndNoteAPAChicagoDIN 1505HarvardMSOffice XML MaBoSS 2.0: an environment for stochastic Boolean modeling.

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MaBoSS 2.0: an environment for stochastic Boolean modeling.