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VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering.

B. Verbist, K. Thys, J. Reumers, Y. Wetzels, K. der Borght, W. Talloen, J. Aerssens, L. Clement, and O. Thas. Bioinformatics, 31 (1): 94-101 (2015)

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ViVaMBC: estimating viral sequence variation in complex populations from illumina deep-sequencing data using model-based clustering.B. Verbist, L. Clement, J. Reumers, K. Thys, A. Vapirev, W. Talloen, Y. Wetzels, J. Meys, J. Aerssens, L. Bijnens and 1 other author(s). BMC Bioinformatics, (2015)Improved base-calling and quality scores for 454 sequencing based on a Hurdle Poisson model.K. Beuf, J. Schrijver, O. Thas, W. Criekinge, R. Irizarry, and L. Clement. BMC Bioinformatics, (2012)The use of semiparametric mixed models to analyze PamChip® peptide array data: an application to an oncology experiment.P. Thilakarathne, L. Clement, D. Lin, Z. Shkedy, A. Kasim, W. Talloen, M. Versele, and G. Verbeke. Bioinformatics, 27 (20): 2859-2865 (2011)VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering.B. Verbist, K. Thys, J. Reumers, Y. Wetzels, K. der Borght, W. Talloen, J. Aerssens, L. Clement, and O. Thas. Bioinformatics, 31 (1): 94-101 (2015)Analysis of tiling array expression studies with flexible designs in Bioconductor (waveTiling.K. Beuf, P. Pipelers, M. Andriankaja, O. Thas, D. Inzé, C. Crainiceanu, and L. Clement. BMC Bioinformatics, (2012)QQ-SNV: single nucleotide variant detection at low frequency by comparing the quality quantiles.K. der Borght, K. Thys, Y. Wetzels, L. Clement, B. Verbist, J. Reumers, H. van Vlijmen, and J. Aerssens. BMC Bioinformatics, (2015)Using variant databases for variant prioritization and to detect erroneous genotype-phenotype associations.B. Broeckx, L. Peelman, J. Saunders, D. Deforce, and L. Clement. BMC Bioinformatics, 18 (1): 535:1-535:10 (2017)Impact of variance components on reliability of absolute quantification using digital PCR.B. Jacobs, E. Goetghebeur, and L. Clement. BMC Bioinformatics, (2014)unifiedWMWqPCR: the unified Wilcoxon-Mann-Whitney test for analyzing RT-qPCR data in R.J. Neve, J. Meys, J. Ottoy, L. Clement, and O. Thas. Bioinformatics, 30 (17): 2494-2495 (2014)

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VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering.

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copydeleteadd this publication to your clipboardcommunity posthistory of this postURLDOIBibTeXEndNoteAPAChicagoDIN 1505HarvardMSOffice XML VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering.

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VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering.