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Bubbles: Alternative Splicing Events of Arbitrary Dimension in Splicing Graphs., , and . RECOMB, volume 4955 of Lecture Notes in Computer Science, page 372-395. Springer, (2008)Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing., , , , , , , and . Briefings in Bioinformatics, 11 (2): 181-197 (2010)An automated method for detecting alternatively spliced protein domains., and . Bioinformatics, 34 (22): 3809-3816 (2018)ASTALAVISTA: dynamic and flexible analysis of alternative splicing events in custom gene datasets., and . Nucleic Acids Research, 35 (Web-Server-Issue): 297-299 (2007)Divide-and-conquer multiple alignment with segment-based constraints., , and . ECCB, page 189-195. (2003)Digital extractor: analysis of digital differential display output., , , , , and . Bioinformatics, 19 (12): 1592-1593 (2003)Panta rhei (QAlign2): an open graphical environment for sequence analysis., , , and . Bioinformatics, 22 (7): 889-890 (2006)Alignment of Tandem Repeats with Excision, Duplication, Substitution and Indels (EDSI)., , , and . WABI, volume 3692 of Lecture Notes in Computer Science, page 276-290. Springer, (2005)Exact Transcriptome Reconstruction from Short Sequence Reads., , , and . WABI, volume 5251 of Lecture Notes in Computer Science, page 50-63. Springer, (2008)Integrated multiple sequence alignment.. Bielefeld University, (2005)