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Evolutionary Perspectives on Protein Thermodynamics.. International Conference on Computational Science, volume 3039 of Lecture Notes in Computer Science, page 718-727. Springer, (2004)Assessing the Accuracy of Ancestral Protein Reconstruction Methods., , , and . PLoS Computational Biology, (2006)Deciphering the Swine-Flu Pandemics of 1918 and 2009., , , and . RECOMB, volume 6044 of Lecture Notes in Computer Science, page 572-573. Springer, (2010)In Silico Biology., , , and . Pacific Symposium on Biocomputing, page 477-480. World Scientific Publishing, (2010)A Bayesian Approach to Sequence Alignment Algorithms for Protein Structure Recognition., , and . HICSS (5), page 306-315. IEEE Computer Society, (1994)Optimizing for success: a new score function for distantly related protein sequence comparison., and . RECOMB, page 177-182. ACM, (2000)OPTIMA: A New Score Function for the Detection of Remote Homologs., and . Mathematical Methods for Protein Structure Analysis and Design, volume 2666 of Lecture Notes in Computer Science, page 99-108. Springer, (2003)SubRecon: ancestral reconstruction of amino acid substitutions along a branch in a phylogeny., and . Bioinformatics, 34 (13): 2297-2299 (2018)Performance of an iterated T-HMM for homology detection., and . Bioinformatics, 20 (14): 2175-2180 (2004)Analyzing Rate Heterogeneity During Protein Evolution., and . Pacific Symposium on Biocomputing, page 191-202. (2001)