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KinImmerse: Macromolecular VR for NMR ensembles., , , , , , , and . Source Code for Biology and Medicine, (2009)High-Grade Ore for Data Mining in 3D Structures., and . Computational Biology and Genome Informatics, World Scientific, (2003)MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes., , , and . Nucleic Acids Research, 32 (Web-Server-Issue): 615-619 (2004)VIEW: an exploratory molecular visualization system with user-definable interaction sequences., , , and . SIGGRAPH, page 117-126. ACM, (1993)The Role of Local Backrub Motions in Evolved and Designed Mutations., , , , , and . PLoS Computational Biology, (2012)The RNA Ontology (RNAO): An ontology for integrating RNA sequence and structure data., , , , , , , , , and 2 other author(s). Applied Ontology, 6 (1): 53-89 (2011)MolProbity: all-atom contacts and structure validation for proteins and nucleic acids., , , , , , , , , and 1 other author(s). Nucleic Acids Research, 35 (Web-Server-Issue): 375-383 (2007)Algorithm for backrub motions in protein design., , , , and . ISMB, page 196-204. (2008)Protein molecules in 3D: complex behavior from simple local geometry plus weak interactions., and . Symposium on Computational Geometry, page 79-80. ACM, (2012)