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Optimally Parsing a Sequence into Different Classes Based on Multiple Types of Evidence.

, and . ISMB, page 369-375. AAAI, (1994)

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MATRIX SEARCH 1.0: a computer program that scans DNA sequences for transcriptional elements using a database of weight matrices., , and . Computer Applications in the Biosciences, 11 (5): 563-566 (1995)A Phylogenetic Approach to RNA Structure Prediction., , and . ISMB, page 10-17. AAAI, (1999)Optimally Parsing a Sequence into Different Classes Based on Multiple Types of Evidence., and . ISMB, page 369-375. AAAI, (1994)Automated Alignment of RNA Sequences to Pseudoknotted Structures., and . ISMB, page 311-318. AAAI, (1997)Specificity of Protein-DNA Interactions.. Gene Regulations and Metabolism, page 87-101. MIT Press, (2002)SAMIE: Statistical Algorithm for Modeling Interaction Energies., , , and . Pacific Symposium on Biocomputing, page 115-126. (2001)A graph theoretical approach for predicting common RNA secondary structure motifs including pseudoknots in unaligned sequences., , and . Bioinformatics, 20 (10): 1603-1611 (2004)Discriminative motif optimization based on perceptron training., and . Bioinformatics, 30 (7): 941-948 (2014)Finding Common Sequence and Structure Motifs in a Set of RNA Sequences., , and . ISMB, page 120-123. AAAI, (1997)Session Introduction., , , and . Pacific Symposium on Biocomputing, page 470-471. World Scientific, (2007)