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Experimental Evaluation of Molecular Dynamics Simulations on Multi-core Systems.

, , , and . HiPC, volume 5374 of Lecture Notes in Computer Science, page 131-141. Springer, (2008)

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Performance Characterization of a Hierarchical MPI Implementation on Large-scale Distributed-memory Platforms., , , and . ICPP, page 132-139. IEEE Computer Society, (2009)Towards microsecond biological molecular dynamics simulations on hybrid processors., , , and . HPCS, page 98-107. IEEE, (2010)A Methodology for Developing High Fidelity Communication Models for Large-Scale Applications Targeted on Multicore Systems., , , and . SBAC-PAD, page 55-62. IEEE Computer Society, (2008)A framework to develop symbolic performance models of parallel applications., and . IPDPS, IEEE, (2006)On the Path to Enable Multi-scale Biomolecular Simulations on PetaFLOPS Supercomputer with Multi-core Processors., and . IPDPS, page 1-8. IEEE, (2007)A PCIe congestion-aware performance model for densely populated accelerator servers., , , , and . SC, page 63. ACM, (2016)Energy efficient biomolecular simulations with FPGA-based reconfigurable computing., , , , and . Conf. Computing Frontiers, page 83-84. ACM, (2010)Sensitivity Analysis of Biomolecular Simulations using Symbolic Models., , and . BIBE, page 294-300. IEEE Computer Society, (2007)Performance evaluation of the cray XT3 configured with dual core opteron processors., , and . PPOPP, page 148-149. ACM, (2007)Early experiences with scientific applications on the IBM Blue Gene/Q supercomputer., , , , , , , , , and 4 other author(s). IBM Journal of Research and Development, 57 (1/2): 14 (2013)