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Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach.

P. Meyer, T. Cokelaer, D. Chandran, K. Kim, P. Loh, G. Tucker, M. Lipson, B. Berger, C. Kreutz, A. Raue, B. Steiert, J. Timmer, E. Bilal, H. Sauro, G. Stolovitzky, and J. Saez-Rodriguez. BMC Systems Biology, (2014)

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Dipl.-Ing. Thomas Kuestner

Scan time reduction in DWI of the pancreas using simultaneous multislice technique with different acceleration factors: how fast can we go?J. Taron, P. Martirosian, T. Küstner, M. Notohamiprodjo, J. Weiß, A. Othman, K. Nikolaou, and C. Schraml. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, Hawaii, USA, (April 2017)The use of a generalized reconstruction by inversion of coupled systems (GRICS) approach for generic respiratory motion correction in PET/MR imagingH. Fayad, F. Odille, H. Schmidt, C. Würslin, T. Küstner, J. Felblinger, and D. Visvikis. Physics in medicine and biology, 60 (6): 2529-46 (March 2015)In-vivo MR-derived non-rigid motion correction of simultaneously acquired PETT. Küstner, C. Würslin, S. Gatidis, P. Martirosian, N. Schwenzer, B. Yang, and H. Schmidt. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Toronto, Canada, (June 2015)

Univ. -Prof. Dr. Thomas Schleid University of Stuttgart

Die Serie caesiumhaltiger Thioarsenate(V) der Lanthanoide vom Formeltyp Cs3LnAsS42 mit Ln = La–Nd und SmK. Engel, and T. Schleid. Zeitschrift für Naturforschung. B, Chemical sciences, 79 (1): 29-38 (2024)Synthesis and Characterization of High-Energy Anti-Perovskite Compounds Cs3XB12H12 Based on Cesium Dodecahydro-Closo-Borate with Molecular Oxoanions (X− = NO3−, ClO3− and ClO4−)R. Aghaei Hakkak, I. Tiritiris, and T. Schleid. Molecules, 29 (2): 382 (2024)Band-Gap Engineering and Unusual Behavior of Electronic Properties during Anion Substitution of Sulfur in LaFSeD. Zagorac, C. Buyer, J. Zagorac, T. Skundric, J. Schön, and T. Schleid. Crystal growth & design, 24 (4): 1648–1657 (2024)

Thomas Maier

Other publications of authors with the same name

MEIGO: an open-source software suite based on metaheuristics for global optimization in systems biology and bioinformatics.J. Egea, D. Henriques, T. Cokelaer, A. Villaverde, A. MacNamara, D. Danciu, J. Banga, and J. Saez-Rodriguez. BMC Bioinformatics, (2014)Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach.P. Meyer, T. Cokelaer, D. Chandran, K. Kim, P. Loh, G. Tucker, M. Lipson, B. Berger, C. Kreutz, A. Raue and 6 other author(s). BMC Systems Biology, (2014)Efficient randomization of biological networks while preserving functional characterization of individual nodes.F. Iorio, M. Bernardo-Faura, A. Gobbi, T. Cokelaer, G. Jurman, and J. Saez-Rodriguez. BMC Bioinformatics, (2016)'Sequana': a Set of Snakemake NGS pipelines.T. Cokelaer, D. Desvillechabrol, R. Legendre, and M. Cardon. J. Open Source Software, 2 (16): 352 (2017)CellNOptR: a flexible toolkit to train protein signaling networks to data using multiple logic formalisms.C. Terfve, T. Cokelaer, D. Henriques, A. MacNamara, E. Gonçalves, M. Morris, M. van Iersel, D. Lauffenburger, and J. Saez-Rodriguez. BMC Systems Biology, (2012)Sequanix: a dynamic graphical interface for Snakemake workflows.D. Desvillechabrol, R. Legendre, C. Rioualen, C. Bouchier, J. van Helden, S. Kennedy, and T. Cokelaer. Bioinformatics, 34 (11): 1934-1936 (2018)BioServices: a common Python package to access biological Web Services programmatically.T. Cokelaer, D. Pultz, L. Harder, J. Serra-Musach, and J. Saez-Rodriguez. Bioinformatics, 29 (24): 3241-3242 (2013)Exhaustively characterizing feasible logic models of a signaling network using Answer Set Programming.C. Guziolowski, S. Videla, F. Eduati, S. Thiele, T. Cokelaer, A. Siegel, and J. Saez-Rodriguez. Bioinformatics, 29 (18): 2320-2326 (2013)Using Python to Dive into Signalling Data with CellNOpt and BioServices.T. Cokelaer, and J. Saez-Rodriguez. CoRR, (2014)SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools.C. Chaouiya, D. Bérenguier, S. Keating, A. Naldi, M. van Iersel, N. Rodriguez, A. Dräger, F. Büchel, T. Cokelaer, B. Kowal and 14 other author(s). BMC Systems Biology, (2013)

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Disambiguation of "Cokelaer, Thomas"

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Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach.

Please choose a person to relate this publication to

Dipl.-Ing. Thomas Kuestner

Univ. -Prof. Dr. Thomas Schleid University of Stuttgart

Thomas Maier

Thomas Maier

Thomas Maier

Other publications of authors with the same name

Disambiguation

PUMA

Disambiguation of "Cokelaer, Thomas"

copydeleteadd this publication to your clipboardcommunity posthistory of this postURLDOIBibTeXEndNoteAPAChicagoDIN 1505HarvardMSOffice XML Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach.

Please choose a person to relate this publication to

Dipl.-Ing. Thomas Kuestner

Univ. -Prof. Dr. Thomas Schleid University of Stuttgart

Thomas Maier

Thomas Maier

Thomas Maier

Other publications of authors with the same name

Disambiguation

copy delete add this publication to your clipboard
community post
history of this post
URL
DOI
BibTeX
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APA
Chicago
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Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach.