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Alignment-free inference of hierarchical and reticulate phylogenomic relationships., , , , , , , and . Briefings in Bioinformatics, 20 (2): 426-435 (2019)Clustering evolving proteins into homologous families., , and . BMC Bioinformatics, (2013)A visual framework for sequence analysis using n-grams and spectral rearrangement., , , , , , and . Bioinformatics, 26 (6): 737-744 (2010)Protein-protein interaction as a predictor of subcellular location., , , and . BMC Systems Biology, (2009)Complex-based analysis of dysregulated cellular processes in cancer., , , , , , and . BMC Systems Biology, 8 (S-4): S1 (2014)mCOPA: analysis of heterogeneous features in cancer expression data., , , , , and . J. Clinical Bioinformatics, (2012)IllouraTM: a software tool for analysis, visualization and semantic querying of cellular and other spatial biological data., , , , , and . Bioinformatics, 25 (9): 1208-1210 (2009)Gene Ontology-driven inference of protein-protein interactions using inducers., , , and . Bioinformatics, 28 (1): 69-75 (2012)Detecting recombination in evolving nucleotide sequences., , and . BMC Bioinformatics, (2006)A Semantic Web Ontology for Small Molecules and Their Biological Targets., , , and . Journal of Chemical Information and Modeling, 50 (5): 732-741 (2010)