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The Proteomics Identifications database: 2010 update., , , , , , , and . Nucleic Acids Research, 38 (Database-Issue): 736-742 (2010)OLS Dialog: An open-source front end to the Ontology Lookup Service., , , and . BMC Bioinformatics, (2010)The Ontology Lookup Service: bigger and better., , , , , and . Nucleic Acids Research, 38 (Web-Server-Issue): 155-160 (2010)compomics-utilities: an open-source Java library for computational proteomics., , , , , , and . BMC Bioinformatics, (2011)BioContainers: an open-source and community-driven framework for software standardization., , , , , , , , , and 8 other author(s). Bioinformatics, 33 (16): 2580-2582 (2017)Computational and Statistical Methods for Protein Quantification by Mass Spectrometry., , , and . Wiley, (2013)MassSorter: a tool for administrating and analyzing data from mass spectrometry experiments on proteins with known amino acid sequences., , and . BMC Bioinformatics, (2006)PeptideMapper: efficient and versatile amino acid sequence and tag mapping., , , , , and . Bioinformatics, 33 (13): 2042-2044 (2017)