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A molecular model for transcription in the RNA world based on the ribosome large subunit.. Computational Biology and Chemistry, 28 (5-6): 313-319 (2004)Testing homology with Contact Accepted mutatiOn (CAO): a contact-based Markov model of protein evolution., , , and . Computational Biology and Chemistry, 27 (2): 93-102 (2003)Structure Comparison and Structure Patterns., , and . Journal of Computational Biology, 7 (5): 685-716 (2000)Re-Evaluating the "Rules" of Protein Topology., , and . Journal of Computational Biology, 17 (10): 1371-1384 (2010)Threading Using Neural nEtwork (TUNE): the measure of protein sequence-structure compatibility., , and . Bioinformatics, 18 (10): 1350-1357 (2002)Evolutionary inaccuracy of pairwise structural alignments., and . Bioinformatics, 28 (9): 1209-1215 (2012)Review of Modelling Techniques for In Vivo Muscle Force Estimation in the Lower Extremities during Strength Training., , , and . Comp. Math. Methods in Medicine, (2015)An algorithm to parse segment packing in predicted protein contact maps.. Algorithms for Molecular Biology, (2016)Algorithms for matching partially labelled sequence graphs.. Algorithms for Molecular Biology, 12 (1): 24:1-24:22 (2017)Hierarchic Inertial Projection: A Fast Distance Matrix Embedding Algorithm., and . Computers & Chemistry, 21 (1): 13-23 (1997)