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Subfamily HMMS in Functional Genomics., , , , and . Pacific Symposium on Biocomputing, World Scientific, (2005)ResBoost: characterizing and predicting catalytic residues in enzymes., , , , , and . BMC Bioinformatics, (2009)SATCHMO-JS: a webserver for simultaneous protein multiple sequence alignment and phylogenetic tree construction., , , , , and . Nucleic Acids Research, 38 (Web-Server-Issue): 29-34 (2010)Using Dirichlet Mixture Priors to Derive Hidden Markov Models for Protein Families., , , , , and . ISMB, page 47-55. AAAI, (1993)Berkeley PHOG: PhyloFacts orthology group prediction web server., , , , and . Nucleic Acids Research, 37 (Web-Server-Issue): 84-89 (2009)Collaborative annotation of genes and proteins between UniProtKB/Swiss-Prot and dictyBase., , , , , , , , , and 29 other author(s). Database, (2009)Active site prediction using evolutionary and structural information., , , , and . Bioinformatics, 26 (5): 617-624 (2010)A comparison of scoring functions for protein sequence profile alignment., and . Bioinformatics, 20 (8): 1301-1308 (2004)Functional Classification Using Phylogenomic Inference., and . PLoS Computational Biology, (2006)Simultaneous Sequence Alignment and Tree Construction Using Hidden Markov Models., and . Pacific Symposium on Biocomputing, page 180-191. (2003)