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Comparative assessment of performance and genome dependence among phylogenetic profiling methods., , , , and . BMC Bioinformatics, (2006)Loop closure via bond scaling and relaxation., , , and . Journal of Computational Chemistry, 14 (5): 556-565 (1993)Computer analysis and structure prediction of nucleic acids and proteins., , , and . Nucleic Acids Research, 12 (1): 417-428 (1984)VisANT 4.0: Integrative network platform to connect genes, drugs, diseases and therapies., , , , , , , and . Nucleic Acids Research, 41 (Webserver-Issue): 225-231 (2013)Smoothing Gene Expression Using Biological Networks., , , and . ICMLA, page 540-545. IEEE Computer Society, (2010)Ensemble Machine Methods for DNA Binding., , and . ICMLA, page 709-716. IEEE Computer Society, (2008)VisANT: an online visualization and analysis tool for biological interaction data., , , and . BMC Bioinformatics, (2004)Predictome: a database of putative functional links between proteins., , , , and . Nucleic Acids Research, 30 (1): 306-309 (2002)Condition specific transcription factor binding site characterization in Saccharomyces cerevisiae., and . Bioinformatics, 18 (10): 1289-1296 (2002)Binding Site Graphs: A New Graph Theoretical Framework for Prediction of Transcription Factor Binding Sites., , and . PLoS Computational Biology, (2007)