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A scalable method for integration and functional analysis of multiple microarray datasets., , , and . Bioinformatics, 22 (23): 2890-2897 (2006)Simultaneous Genome-Wide Inference of Physical, Genetic, Regulatory, and Functional Pathway Components., , , and . PLoS Computational Biology, (2010)Directing Experimental Biology: A Case Study in Mitochondrial Biogenesis., , , , , , and . PLoS Computational Biology, (2009)Global Prediction of Tissue-Specific Gene Expression and Context-Dependent Gene Networks in Caenorhabditis elegans., , , and . PLoS Computational Biology, (2009)Multivariable association discovery in population-scale meta-omics studies., , , , , , , , , and 10 other author(s). PLoS Comput. Biol., (2021)curatedOvarianData: clinically annotated data for the ovarian cancer transcriptome., , , , , , , , , and 2 other author(s). Database, (2013)The impact of incomplete knowledge on evaluation: an experimental benchmark for protein function prediction., , , , , and . Bioinformatics, 25 (18): 2404-2410 (2009)Integrated functional networks of process, tissue, and developmental stage specific interactions in Arabidopsis thaliana., , , , and . BMC Systems Biology, (2010)A Bayesian method for detecting pairwise associations in compositional data., , , and . PLoS Computational Biology, (2017)A Guide to Enterotypes across the Human Body: Meta-Analysis of Microbial Community Structures in Human Microbiome Datasets., , , , , , , and . PLoS Computational Biology, (2013)