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Data Integration Issues in the Reconstruction of the Genome-Scale Metabolic Model of Zymomonas Mobillis.

J. Pinto, O. Días, A. Lourenço, S. Carneiro, E. Ferreira, I. Rocha, and M. Rocha. IWPACBB, volume 49 of Advances in Soft Computing, page 92-101. Springer, (2008)

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Dr. Isabel Plocher University of Stuttgart

Isabel Janowsky University of Stuttgart

Aya Isabel Kleine University of Stuttgart

Isabel Maria Pessanha Marcante University of Stuttgart

Other publications of authors with the same name

Random sampling of elementary flux modes in large-scale metabolic networks.D. Machado, Z. Soons, K. Patil, E. Ferreira, and I. Rocha. Bioinformatics, 28 (18): 515-521 (2012)Challenges in integrating Escherichia coli molecular biology data.A. Lourenço, S. Carneiro, M. Rocha, E. Ferreira, and I. Rocha. Briefings in Bioinformatics, 12 (2): 91-103 (2011)Stoichiometric Representation of Gene-Protein-Reaction Associations Leverages Constraint-Based Analysis from Reaction to Gene-Level Phenotype Prediction.D. Machado, M. Herrgård, and I. Rocha. PLoS Computational Biology, (2016)Re-annotation of the genome sequence of Helicobacter pylori 26695.T. Resende, D. Correia, M. Rocha, and I. Rocha. J. Integrative Bioinformatics, (2013)An integrated computational environment for elementary modes analysis of biochemical networks.P. Maia, P. Vilaça, I. Rocha, M. Pont, J. Tomb, and M. Rocha. IJDMB, 6 (4): 382-395 (2012)Evolutionary Approaches for Strain Optimization Using Dynamic Models under a Metabolic Engineering Perspective.P. Evangelista, I. Rocha, E. Ferreira, and M. Rocha. EvoBIO, volume 5483 of Lecture Notes in Computer Science, page 140-151. Springer, (2009)Development of an Integrated Framework for Minimal Cut Set Enumeration in Constraint-Based Models.V. Vieira, P. Maia, I. Rocha, and M. Rocha. PACBB, volume 477 of Advances in Intelligent Systems and Computing, page 193-201. Springer, (2016)A framework for the integrated analysis of metabolic and regulatory networks.R. Mendes, A. Lourenço, S. Carneiro, M. Rocha, I. Rocha, and E. Ferreira. BIBE, page 1-6. IEEE, (2008)Interpreting the Regulatory Interplay in E. coli Metabolic Pathways.A. Lourenço, S. Carneiro, J. Pinto, M. Rocha, E. Ferreira, and I. Rocha. PACBB, volume 93 of Advances in Intelligent and Soft Computing, page 303-312. Springer, (2011)Computational Tools for Strain Optimization by Tuning the Optimal Level of Gene Expression.E. Gonçalves, I. Rocha, and M. Rocha. PACBB, volume 154 of Advances in Intelligent and Soft Computing, page 251-258. Springer, (2012)