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Cake: a bioinformatics pipeline for the integrated analysis of somatic variants in cancer genomes.

, , , and . Bioinformatics, 29 (17): 2208-2210 (2013)

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Improving Computational Predictions of Cis- Regulatory Binding Sites., , , , , , and . Pacific Symposium on Biocomputing, page 391-402. World Scientific, (2006)Integrating genomic binding site predictions using real-valued meta classifiers., , , , , and . Neural Computing and Applications, 18 (6): 577-590 (2009)Ensembl 2002: accommodating comparative genomics., , , , , , , , , and 26 other author(s). Nucleic Acids Research, 31 (1): 38-42 (2003)Using Varying Negative Examples to Improve Computational Predictions of Transcription Factor Binding Sites., , , , , and . EANN, volume 311 of Communications in Computer and Information Science, page 234-243. Springer, (2012)Predicting Binding Sites in the Mouse Genome., , , , and . ICMLA, page 476-481. IEEE Computer Society, (2007)Uncovering a Macrophage Transcriptional Program by Integrating Evidence from Motif Scanning and Expression Dynamics., , , , , , , , , and 7 other author(s). PLoS Computational Biology, (2008)Combining experts in order to identify binding sites in yeast and mouse genomic data., , , , , , and . Neural Networks, 21 (6): 856-861 (2008)Integrating Binding Site Predictions Using Non-linear Classification Methods., , , , , and . Deterministic and Statistical Methods in Machine Learning, volume 3635 of Lecture Notes in Computer Science, page 229-241. Springer, (2004)Using Real-Valued Meta Classifiers to Integrate and Contextualize Binding Site Predictions., , , , , , and . ICANNGA (1), volume 4431 of Lecture Notes in Computer Science, page 822-829. Springer, (2007)A finite state automaton model for multi-neuron simulations., , , and . Neurocomputing, (2002)