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Automated group assignment in large phylogenetic trees using GRUNT: GRouping, Ungrouping, Naming Tool., , , , , and . BMC Bioinformatics, (2007)NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes., , , , , , , and . Nucleic Acids Research, 34 (Web-Server-Issue): 394-399 (2006)IMG/M: a data management and analysis system for metagenomes., , , , , , , , , and 4 other author(s). Nucleic Acids Research, 36 (Database-Issue): 534-538 (2008)An experimental metagenome data management and analysis system., , , , , , , , , and 3 other author(s). ISMB (Supplement of Bioinformatics), page 359-367. (2006)The Genomes On Line Database (GOLD) v.2: a monitor of genome projects worldwide., , , and . Nucleic Acids Research, 34 (Database-Issue): 332-334 (2006)Annotation of metagenome short reads using proxygenes., , , , , , , and . ECCB, page 7-13. (2008)CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats., , , , , , and . BMC Bioinformatics, (2007)ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes., , and . Bioinformatics, 25 (20): 2737-2738 (2009)SNP-VISTA: An interactive SNP visualization tool., , , , , , and . BMC Bioinformatics, (2005)The integrated microbial genomes (IMG) system., , , , , , , , , and 4 other author(s). Nucleic Acids Research, 34 (Database-Issue): 344-348 (2006)