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Pattern Matching in Degenerate DNA/RNA Sequences.

, , and . WALCOM, page 109-120. Bangladesh Academy of Sciences (BAS), (2007)

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Indexing Factors with Gaps., and . Algorithmica, 55 (1): 60-70 (2009)Tree template matching in ranked ordered trees by pushdown automata., , , , and . J. Discrete Algorithms, (2012)Linear time algorithm for the longest common repeat problem., , and . J. Discrete Algorithms, 5 (2): 243-249 (2007)Efficient algorithms for three variants of the LPF table., , , , and . J. Discrete Algorithms, (2012)Computing the Minimum k-Cover of a String., , , , and . Stringology, page 51-64. Department of Computer Science and Engineering, Faculty of Electrical Engineering, Czech Technical University, (2003)Parallel Algorithms for Degenerate and Weighted Sequences Derived from High Throughput Sequencing Technologies., , and . Stringology, page 249-262. Prague Stringology Club, Department of Computer Science and Engineering, Faculty of Electrical Engineering, Czech Technical University in Prague, (2009)Computing the Repetitions in a Weighted Sequence., , , and . Stringology, page 91-98. Department of Computer Science and Engineering, Faculty of Electrical Engineering, Czech Technical University, (2003)Validating and Decomposing Partially Occluded Two-Dimensional Images (Extended Abstract)., and . Stringology, page 83-94. Department of Computer Science and Engineering, Faculty of Electrical Engineering, Czech Technical University, (1998)Finding Motifs with Gaps., , and . ISMIR, (2000)A Pattern Extraction Algorithm for Abstract Melodic Representations that Allow Partial Overlapping of Intervallic Categories., , , , and . ISMIR, page 167-174. (2005)