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Integrated simultaneous analysis of different biomedical data types with exact weighted bi-cluster editing., , and . J. Integrative Bioinformatics, (2012)PetriScape - A plugin for discrete Petri net simulations in Cytoscape., , , and . J. Integrative Bioinformatics, (2016)Jllumina - A comprehensive Java-based API for statistical Illumina Infinium HumanMethylation450 and MethylationEPIC data processing., , , , , , , , and . J. Integrative Bioinformatics, (2016)Parameter estimation of qualitative biological regulatory networks on high performance computing hardware., , , , , , , and . BMC Systems Biology, 12 (1): 146:1-146:15 (2018)Covering tree with stars., , and . J. Comb. Optim., 29 (1): 141-152 (2015)A systematic comparison of novel and existing differential analysis methods for CyTOF data., , , , , , , and . Briefings Bioinform., (2022)KeyPathwayMiner: Detecting Case-Specific Biological Pathways Using Expression Data., , , , and . Internet Mathematics, 7 (4): 299-313 (2011)Density parameter estimation for finding clusters of homologous proteins - tracing actinobacterial pathogenicity lifestyles., , , , , , and . Bioinformatics, 29 (2): 215-222 (2013)AltAnalyze and DomainGraph: analyzing and visualizing exon expression data., , , , , and . Nucleic Acids Research, 38 (Web-Server-Issue): 755-762 (2010)Compactness-Preserving Mapping on Trees., , and . CPM, volume 8486 of Lecture Notes in Computer Science, page 162-171. Springer, (2014)