Repeat elements (REs) play important roles for cell function in health and disease. However, RE enrichment analysis in short-read high-throughput sequencing (HTS) data, such as ChIP-seq, is a challenging task.
Description
RepEnTools: an automated repeat enrichment analysis package for ChIP-seq data reveals hUHRF1 Tandem-Tudor domain enrichment in young repeats | Mobile DNA | Full Text
%0 Journal Article
%1 Choudalakis2024
%A Choudalakis, Michel
%A Bashtrykov, Pavel
%A Jeltsch, Albert
%D 2024
%J Mobile DNA
%K ibtb-bc imported myown unibibliografie
%N 1
%P 6
%R 10.1186/s13100-024-00315-y
%T RepEnTools: an automated repeat enrichment analysis package for ChIP-seq data reveals hUHRF1 Tandem-Tudor domain enrichment in young repeats
%U https://doi.org/10.1186/s13100-024-00315-y
%V 15
%X Repeat elements (REs) play important roles for cell function in health and disease. However, RE enrichment analysis in short-read high-throughput sequencing (HTS) data, such as ChIP-seq, is a challenging task.
@article{Choudalakis2024,
abstract = {Repeat elements (REs) play important roles for cell function in health and disease. However, RE enrichment analysis in short-read high-throughput sequencing (HTS) data, such as ChIP-seq, is a challenging task.},
added-at = {2024-04-11T15:55:22.000+0200},
author = {Choudalakis, Michel and Bashtrykov, Pavel and Jeltsch, Albert},
biburl = {https://puma.ub.uni-stuttgart.de/bibtex/20a83fc3d02d5be9407b7c502dcb6ede6/ajeltsch},
day = 03,
description = {RepEnTools: an automated repeat enrichment analysis package for ChIP-seq data reveals hUHRF1 Tandem-Tudor domain enrichment in young repeats | Mobile DNA | Full Text},
doi = {10.1186/s13100-024-00315-y},
interhash = {c2604d498fcc68a7bd30a68306f784be},
intrahash = {0a83fc3d02d5be9407b7c502dcb6ede6},
issn = {1759-8753},
journal = {Mobile DNA},
keywords = {ibtb-bc imported myown unibibliografie},
month = apr,
number = 1,
pages = 6,
timestamp = {2024-04-11T15:55:22.000+0200},
title = {RepEnTools: an automated repeat enrichment analysis package for ChIP-seq data reveals hUHRF1 Tandem-Tudor domain enrichment in young repeats},
url = {https://doi.org/10.1186/s13100-024-00315-y},
volume = 15,
year = 2024
}