Publications

Martin Schwartz, Petros Martirosian, Thomas Küstner, Günter Steidle, Thorsten Feiweier, Bin Yang, and Fritz Schick. Whole-Body Mapping of Spontaneous Mechanical Activities in Musculature. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Montreal, Canada, May 2019. [PUMA: imported]

Thomas Küstner, Aurelien Bustin, Gastao Cruz, Teresa Correia, Giulia Ginami, Radhouene Neji, Rene M Botnar, and Claudia Prieto. 3D Cartesian Free-running Cardiac and Respiratory Resolved Whole-heart MRI. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Montreal, Canada, May 2019. [PUMA: imported]

Thomas Küstner, Martin Schwartz, Yipin Zhu, Petros Martirosian, Bin Yang, Sergios Gatidis, Jürgen Machann, and Fritz Schick. Automated whole-body adipose tissue segmentation in T1-weighted fast spin echo imaging in a cohort of subjects at increased risk for type 2 diabetes. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Montreal, Canada, May 2019. [PUMA: imported]

Thomas Küstner, Bin Yang, Fritz Schick, Sergios Gatidis, and Karim Armanious. Retrospective motion correction using deep learning. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Montreal, Canada, May 2019. [PUMA: imported]

Thomas Küstner, Aurelien Bustin, Olivier Jaubert, Radhouene Neji, Claudia Prieto, and Rene M Botnar. 3D Cartesian Fast-interrupted Steady-state Sequence (FISS) with Intrinsic Fat Suppression. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Montreal, Canada, May 2019. [PUMA: imported]

Annika Liebgott, Jianming Yi, Thomas Küstner, Konstantin Nikolaou, Bin Yang, and Sergios Gatidis. Reinforcement Learning for Automated Reference-free MR Image Quality Assessment. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Montreal, Canada, May 2019. [PUMA: imported]

Marc Fischer, Sven Walter, Christian Klinger, Thomas Küstner, Bin Yang, Mike Notohamiprodjo, and Fritz Schick. Automated Deep Learning based 3D Hip Segmentation in PD-weighted MR images of a large-scale cohort study. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Montreal, Canada, May 2019. [PUMA: imported]

Thomas Küstner, Sarah Müller, Marc Fischer, Martin Schwartz, Petros Martirosian, Bin Yang, Fritz Schick, and Sergios Gatidis. Automated organ segmentation of liver and spleen in whole-body T1-weighted MR images: Transfer learning between epidemiological cohort studies. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Montreal, Canada, May 2019. [PUMA: imported]

Martin Schwartz, Günter Steidle, Petros Martirosian, Thomas Küstner, Jürgen Machann, Cora Weigert, Bin Yang, and Fritz Schick. Longitudinal Analysis of Spontaneous Mechanical Activities in Resting Leg Musculature Assessed by Diffusion-Weighted Imaging: Preliminary Results. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Montreal, Canada, May 2019. [PUMA: imported]

Annika Liebgott, Janik Steyer-Ege, Tobias Hepp, Thomas Küstner, Konstantin Nikolaou, Bin Yang, and Sergios Gatidis. Feature Reduction and Selection: a Study on their Importance in the Context of Radiomics. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Montreal, Canada, May 2019. [PUMA: imported]

Thomas Küstner, Aurelien Bustin, Gastao Cruz, Teresa Correia, Giulia Ginami, Radhouene Neji, Rene M Botnar, and Claudia Prieto. Towards 3D Cartesian Isotropic Free-running Cardiac and Respiratory Resolved Whole-heart MRI. Proceedings of Society for Cardiovascular Magnetic Resonance (SCMR), 2019. [PUMA: kspaceastronauts myown]

Thomas Küstner, Aurelien Bustin, Olivier Jaubert, Radhouene Neji, Claudia Prieto, and Rene M Botnar. 3D Cartesian fast-interrupted steady-state sequence with intrinsic fat suppression for cardiovascular imaging. Proceedings of Society for Cardiovascular Magnetic Resonance (SCMR), 2019. [PUMA: kspaceastronauts myown]

Annika Liebgott, Thomas Küstner, Heiko Strohmeier, Tobias Hepp, Philipp Mangold, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Bin Yang, and Sergios Gatidis. ImFEATbox - A Toolbox for Extraction and Analysis of Medical Image Features. International Journal of Computer Assisted Radiology and Surgery, 2018. [PUMA: corr iqa kspaceastronauts myown]

Sebastian Milde, Annika Liebgott, Ziwei Wu, Wenyi Feng, Jiahuan Yang, Lukas Mauch, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Sergios Gatidis, Fritz Schick, Bin Yang, and Thomas Küstner. Graphical User Interface for Medical Deep Learning - Application to Magnetic Resonance Motion Artifact Detection. Proceedings of the IEEE Asia-Pacific Signal and Information Processing Association (APSIPA), 2018. [PUMA: iqa kspaceastronauts]

T. Küstner, S. Gatidis, A. Liebgott, M. Schwartz, L. Mauch, P. Martirosian, H. Schmidt, NF. Schwenzer, K. Nikolaou, F. Bamberg, B. Yang, and F. Schick. A machine-learning framework for automatic reference-free quality assessment in MRI. Magnetic Resonance Imaging, (53):134 - 147, 2018. [PUMA: iqa kspaceastronauts machinelearning] URL

T. Küstner, S. Müller, M. Fischer, J. Weiß, K. Nikolaou, F. Bamberg, B. Yang, F. Schick, and S. Gatidis. Semantic Organ Segmentation in 3D whole-body MR images. Proceedings of the IEEE International Conference on Image Processing (ICIP), Athen, Greece, 2018. [PUMA: kspaceastronauts myown]

Annika Liebgott, Damian Boborzi, Sergios Gatidis, Fritz Schick, Konstantin Nikolaou, Bin Yang, and Thomas Küstner. Active Learning for automated reference-free MR image quality assessment: descreasing the number of required training samples by reduction of intra-batch redundancy. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Paris, France, June 2018. [PUMA: iqa myown]

Thomas Küstner, Ke Liu, Annika Liebgott, Lukas Mauch, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Bin Yang, Fritz Schick, and Sergios Gatidis. Simultaneous detection and identification of MR artifact types in whole-body imaging. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Paris, France, June 2018. [PUMA: iqa kspaceastronauts myown]

Thomas Küstner, Marc Fischer, Sarah Müller, Daniel Gutmann, Konstantin Nikolaou, Fabian Bamberg, Bin Yang, Fritz Schick, and Sergios Gatidis. Automated segmentation of abdominal organs in T1-weighted MR images using a deep learning approach: application on a large epidemiological MR study. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Paris, France, June 2018. [PUMA: myown]

Thomas Küstner, Martin Schwartz, Petros Martirosian, Konstantin Nikolaou, Sergios Gatidis, Bin Yang, and Fritz Schick. Improved subsampling trajectory for reliable assessment of cardiac and respiratory motion in 5D MRI for body motion correction. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Paris, France, June 2018. [PUMA: myown]

Thomas Küstner, Marvin Jandt, Annika Liebgott, Lukas Mauch, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Sergios Gatidis, Bin Yang, and Fritz Schick. Motion artifact quantification and localization for whole-body MRI. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Paris, France, June 2018. [PUMA: iqa kspaceastronauts myown]

P. Martirosian, R. Pohmann, M. Schwartz, T. Küstner, W. Binder, C. Schraml, N.F. Schwenzer, F. Seith, K. Scheffler, K. Nikolaou, and F. Schick. Measurement of lung perfusion using optimized pseudo-continuous arterial spin labeling of pulmonary arteries and fast True-FISP imaging at 3 Tesla. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, Hawaii, USA, April 2017. [PUMA: myown]

Thomas Küstner, Marvin Jandt, Annika Liebgott, Lukas Mauch, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Sergios Gatidis, Fritz Schick, and Bin Yang. Automatic Motion Artifact Detection for Whole-Body Magnetic Resonance Imaging. Proceedings of the IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2018. [PUMA: iqa kspaceastronauts myown]

Annika Liebgott, Sebastian Milde, Marvin Jandt, Lukas Mauch, Petros Martirosian, Fabian Bamberg, Fritz Schick, Konstantin Nikolaou, Bin Yang, Sergios Gatidis, and Thomas Küstner. Impact of Labeling Process on Automated Motion Artifact Detection in Whole-Body MR Images with a Deep Learning Approach: A Comparative Study. Proceedings of the ISMRM Workshop on Machine Learning, 2018. [PUMA: iqa machinelearning myown]

Jakob Weiss, Petros Martirosian, Jana Taron, Ahmed E. Othman, Thomas Kuestner, Michael Erb, Jens Bedke, Fabian Bamberg, Konstantin Nikolaou, and Mike Notohamiprodjo. Feasibility of accelerated simultaneous multislice diffusion-weighted MRI of the prostate. Journal of Magnetic Resonance Imaging, (46)5:1507--1515, 2017. [PUMA: myown] URL

C. Zhang, P. Martirosian, M. Schwartz, T. Küstner, F. Schick, K. Nikolaou, and M. Notohamiprodjo. Evaluation of 3D Arterial Spin Labeling Technique for Perfusion Measurements of Entire Human Kidneys using a Turbo Gradient Spin Echo Sequence. Proceedings of the Annual Scientific Meeting ESMRMB, Barcelona, Spain, October 2017. [PUMA: myown]

Thomas Küstner, Annika Liebgott, Lukas Mauch, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Bin Yang, Fritz Schick, and Sergios Gatidis. Automated reference-free detection of motion artifacts in magnetic resonance images. Magnetic Resonance Materials in Physics, Biology and Medicine, Sep 20, 2017. [PUMA: iqa kspaceastronauts myown] URL

Thomas Küstner, Martin Schwartz, Petros Martirosian, Sergios Gatidis, Ferdinand Seith, Christopher Gilliam, Thierry Blu, Hadi Fayad, Dimitris Visvikis, F. Schick, B. Yang, H. Schmidt, and N.F Schwenzer. MR-based respiratory and cardiac motion correction for PET imaging. Medical Image Analysis, Elsevier, 2017. [PUMA: PETMR_Moco kspaceastronauts motioncorrection myown] URL

Thomas Küstner, Martin Schwartz, Sergios Gatidis, Nina F. Schwenzer, Holger Schmidt, Bin Yang, Chris Gilliam, Thierry Blu, and Fritz Schick. Local All-Pass Filter (LAP): Efficient Optical Flow-Based Image Registration. Proceedings of the ISMRM Workshop on Motion Correction in MRI and MRS, Cape Town, South Africa, September 2017. [PUMA: kspaceastronauts motioncorrection myown]

Thomas Küstner, Annika Liegbott, Lukas Mauch, Petros Martirosian, Fritz Schick, Fabian Bamberg, Konstantin Nikolaou, Bin Yang, and Sergios Gatidisi. Automatic reference-free motion artifact detection and quantification in T1-weighted MR images of the head and abdomen. Proceedings of the Annual Scientific Meeting ESMRMB, Barcelona, Spain, October 2017. [PUMA: iqa kspaceastronauts myown]

Ferdinand Seith, Holger Schmidt, Julia Kunz, Thomas Küstner, Sergios Gatidis, Konstantin Nikolaou, Christian La Fougère, and Nina F. Schwenzer. Simulation of tracer dose reduction in (18)F-FDG-Positron emission tomography / magnetic resonance imaging (PET/MRI): Effects on oncologic reading, image quality and artifacts. Journal of Nuclear Medicine, 2017. [PUMA: myown] URL

Thomas Küstner, Christian Würslin, Martin Schwartz, Hadi Fayad, Thibaut Merlin, Christopher Gilliam, Thierry Blu, Petros Martirosian, Fritz Schick, Bin Yang, Holger Schmidt, and Nina F. Schwenzer. Motion correction on a human PET/MR scanner: Clinical feasibility of a motion correction system in patients – an update report. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, Hawaii, USA, April 2017. [PUMA: PETMR_Moco kSpaceAstronauts myown]

Thomas Küstner, Annika Liebgott, Lukas Mauch, Petros Martirosian, Konstantin Nikolaou, Fritz Schick, Bin Yang, and Sergios Gatidis. Automatic reference-free detection and quantification of MR image artifacts in human examinations due to motion. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, Hawaii, USA, April 2017. [PUMA: IQA kSpaceAstronauts kspaceastronauts myown]

Sergios Gatidis, Annika Liebgott, Martin Schwartz, Petros Martirosian, Fritz Schick, Konstantin Nikolaou, Bin Yang, and Thomas Küstner. Automated reference-free assessment of MR image quality using an active learning approach: Comparison of Support Vector Machine versus Deep Neural Network classification. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, Hawaii, USA, April 2017. [PUMA: IQA kSpaceAstronauts myown]

Annika Liebgott, Sergios Gatidis, Petros Martirosian, Fritz Schick, Bin Yang, and Thomas Küstner. ImFEATbox: An MR Image Processing Toolbox for Extracting and Analyzing Features. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, Hawaii, USA, April 2017. [PUMA: IQA kSpaceAstronauts myown]

Jakob Weiß, Petros Martirosian, Jana Taron, Ahmed Othman, Thomas Küstner, Michael Erb, J. Bedke, Fabian Bamberg, Konstantin Nikolaou, and Mike Notohamiprodjo. Feasibility of Accelerated Simultaneous Multi-Slice Diffusion-weighted MR Imaging of the Prostate. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Apr, Honolulu, Hawaii, USA, 2017. [PUMA: SMS myown]

Jana Taron, Petros Martirosian, Thomas Küstner, Mike Notohamiprodjo, Jakob Weiß, Ahmed Othman, Konstantin Nikolaou, and Christina Schraml. Scan time reduction in DWI of the pancreas using simultaneous multislice technique with different acceleration factors: how fast can we go?. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, Hawaii, USA, April 2017. [PUMA: SMS myown]

Hadi Fayad, Freddy Odille, Holger Schmidt, Christian Würslin, Thomas Küstner, Jochen Felblinger, and Dimitris Visvikis. The use of a generalized reconstruction by inversion of coupled systems (GRICS) approach for generic respiratory motion correction in PET/MR imaging. Physics in medicine and biology, (60)6:2529-46, March 2015. [PUMA: PETMR_Moco kSpaceAstronauts myown] URL

Sergios Gatidis, Petros Martirosian, Thomas Küstner, Ilja Bezrukov, M. Scharpf, Christina Schraml, Nina F. Schwenzer, and Holger Schmidt. Combined Unsupervised-Supervised Classification of Multiparametric PET/MRI Imaging Data of the Prostate. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Milano, Italy, May 2014. [PUMA: MachineLearning kSpaceAstronauts myown]

Christian Würslin, Thomas Küstner, Sebastian Bartel, Nina F. Schwenzer, Bin Yang, and Holger Schmidt. A Simple-to-Build and Cost-Efficient MR-Compatible Phantom for the Simulation of Non-Rigid Motion. Proceedings of the ISMRM Motion Correction in MRI Workshop, Tromsø, Norway, July 2014. [PUMA: MotionCorrection kSpaceAstronauts myown]

Sergios Gatidis, M. Scharpf, Petros Martirosian, Ilja Bezrukov, Thomas Küstner, J. Hennenlotter, S. Kruck, Sascha Kaufmann, Christina Schraml, Christian La Fougère, Nina F. Schwenzer, and Holger Schmidt. Combined unsupervised-supervised classification of multiparametric PET/MRI data: Application to prostate cancer. NMR in biomedicine, (28)7:914-22, July 2015. [PUMA: MachineLearning kSpaceAstronauts myown] URL

Jana Taron, Petros Martirosian, Nina F. Schwenzer, Michael Erb, Thomas Küstner, Jakob Weiß, Ahmed Othman, Mike Notohamiprodjo, Konstantin Nikolaou, and Christina Schraml. Scan time minimization in hepatic diffusion-weighted imaging: evaluation of the simultaneous multislice acceleration technique with different acceleration factors and gradient preparation schemes. MAGMA, (29)5:739-49, October 2016. [PUMA: SMS myown] URL

Jana Taron, Petros Martirosian, Michael Erb, Thomas Küstner, Nina F. Schwenzer, Ahmed Othman, Jakob Weiß, Mike Notohamiprodjo, Konstantin Nikolaou, and Christina Schraml. Simultaneous multislice diffusion-weighted MRI of the liver: analysis of different breathing schemes in comparison to standard DWI. Journal of Magnetic resonance imaging, (44)4:865-79, October 2016. [PUMA: SMS myown] URL

Christopher Gilliam, Thomas Küstner, and Thierry Blu. 3D Motion Flow Estimation using Local All-Pass Filters. Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI), Prague, Czech Republic, April 2016. [PUMA: MotionCorrection kSpaceAstronauts myown] URL

Martin Schwartz, Thomas Küstner, Christian Würslin, Petros Martirosian, Nina F. Schwenzer, Fritz Schick, Bin Yang, and Holger Schmidt. Image Reconstruction System for Compressed Sensing Retrospective Motion Correction for the Application in Clinical Practice. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Singapore, May 2016. [PUMA: Gadgetron MotionCorrection PETMR_Moco kSpaceAstronauts myown]

Holger Schmidt, Nina F. Schwenzer, Sergios Gatidis, Thomas Küstner, Konstantin Nikolaou, Fritz Schick, and Petros Martirosian. Systematic evaluation of amide proton chemical exchange saturation transfer at 3T: Effects of Protein Concentration, pH, and Acquisition Parameters. Investigative Radiology, (51)10:635-46, October 2016. [PUMA: cest myown] URL

Christina Schraml, Jana Taron, Nina F. Schwenzer, Michael Erb, Holger Schmidt, Thomas Küstner, Jakob Weiß, Mike Notohamiprodjo, Konstantin Nikolaou, Fritz Schick, and Petros Martirosian. Beschleunigte Diffusionsbildgebung der Leber mittels simultaner Mehrschicht (SMS)-Technik: Einfluss des Atemschemas auf qualitative und quantitative Bildparameter. RÖFO - Fortschritte auf dem Gebiet der Radiologie 188, March 2016. [PUMA: SMS myown]

Jana Taron, Petros Martirosian, Michael Erb, Thomas Küstner, Nina F. Schwenzer, Ahmed Othman, Jakob Weiß, Mike Notohamiprodjo, Konstantin Nikolaou, and Christina Schraml. Messzeitreduktion in der Leber-Diffusionsbildgebung mittels simultaner Mehrschichttechnik: Vergleich verschiedener Präparationstechniken und Beschleunigungsfaktoren. RÖFO - Fortschritte auf dem Gebiet der Radiologie 188, March 2016. [PUMA: SMS myown]

Christina Schraml, Jana Taron, Nina F. Schwenzer, Holger Schmidt, Thomas Küstner, Michael Erb, Mike Notohamiprodjo, Konstantin Nikolaou, Fritz Schick, and Petros Martirosian. Simultaneous multislice accelerated diffusion-weighted imaging of the liver: comparison of different breathing schemes with standard sequences as reference. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Singapore, May 2016. [PUMA: SMS myown]

Hadi Fayad, Holger Schmidt, Thomas Küstner, and Dimitris Visvikis. The use of a MR based respiratory motion model for optimal respiratory motion correction in PET/MR imaging. Proceedings of the PSMR, Cologne, Germany, May 2016. [PUMA: PETMR_Moco kSpaceAstronauts myown]