Publications

Thomas Küstner, Aurelien Bustin, Olivier Jaubert, Radhouene Neji, Claudia Prieto, and Rene M Botnar. 3D Cartesian fast-interrupted steady-state sequence with intrinsic fat suppression for cardiovascular imaging. Proceedings of Society for Cardiovascular Magnetic Resonance (SCMR), 2019. [PUMA: myown kspaceastronauts]

Thomas Küstner, Aurelien Bustin, Gastao Cruz, Teresa Correia, Giulia Ginami, Radhouene Neji, Rene M Botnar, and Claudia Prieto. Towards 3D Cartesian Isotropic Free-running Cardiac and Respiratory Resolved Whole-heart MRI. Proceedings of Society for Cardiovascular Magnetic Resonance (SCMR), 2019. [PUMA: myown kspaceastronauts]

Thomas Küstner, Ke Liu, Annika Liebgott, Lukas Mauch, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Bin Yang, Fritz Schick, and Sergios Gatidis. Simultaneous detection and identification of MR artifact types in whole-body imaging. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Paris, France, June 2018. [PUMA: myown kspaceastronauts iqa]

Thomas Küstner, Marvin Jandt, Annika Liebgott, Lukas Mauch, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Sergios Gatidis, Bin Yang, and Fritz Schick. Motion artifact quantification and localization for whole-body MRI. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Paris, France, June 2018. [PUMA: myown kspaceastronauts iqa]

Annika Liebgott, Thomas Küstner, Heiko Strohmeier, Tobias Hepp, Philipp Mangold, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Bin Yang, and Sergios Gatidis. ImFEATbox - A Toolbox for Extraction and Analysis of Medical Image Features. International Journal of Computer Assisted Radiology and Surgery, 2018. [PUMA: myown corr kspaceastronauts iqa]

Thomas Küstner, Marvin Jandt, Annika Liebgott, Lukas Mauch, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Sergios Gatidis, Fritz Schick, and Bin Yang. Automatic Motion Artifact Detection for Whole-Body Magnetic Resonance Imaging. Proceedings of the IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2018. [PUMA: myown kspaceastronauts iqa]

Sebastian Milde, Annika Liebgott, Ziwei Wu, Wenyi Feng, Jiahuan Yang, Lukas Mauch, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Sergios Gatidis, Fritz Schick, Bin Yang, and Thomas Küstner. Graphical User Interface for Medical Deep Learning - Application to Magnetic Resonance Motion Artifact Detection. Proceedings of the IEEE Asia-Pacific Signal and Information Processing Association (APSIPA), 2018. [PUMA: kspaceastronauts iqa]

T. Küstner, S. Gatidis, A. Liebgott, M. Schwartz, L. Mauch, P. Martirosian, H. Schmidt, NF. Schwenzer, K. Nikolaou, F. Bamberg, B. Yang, and F. Schick. A machine-learning framework for automatic reference-free quality assessment in MRI. Magnetic Resonance Imaging, (53):134 - 147, 2018. [PUMA: kspaceastronauts machinelearning iqa] URL

T. Küstner, S. Müller, M. Fischer, J. Weiß, K. Nikolaou, F. Bamberg, B. Yang, F. Schick, and S. Gatidis. Semantic Organ Segmentation in 3D whole-body MR images. Proceedings of the IEEE International Conference on Image Processing (ICIP), Athen, Greece, 2018. [PUMA: myown kspaceastronauts]

Thomas Küstner, Annika Liegbott, Lukas Mauch, Petros Martirosian, Fritz Schick, Fabian Bamberg, Konstantin Nikolaou, Bin Yang, and Sergios Gatidisi. Automatic reference-free motion artifact detection and quantification in T1-weighted MR images of the head and abdomen. Proceedings of the Annual Scientific Meeting ESMRMB, Barcelona, Spain, October 2017. [PUMA: myown kspaceastronauts iqa]

Thomas Küstner, Annika Liebgott, Lukas Mauch, Petros Martirosian, Fabian Bamberg, Konstantin Nikolaou, Bin Yang, Fritz Schick, and Sergios Gatidis. Automated reference-free detection of motion artifacts in magnetic resonance images. Magnetic Resonance Materials in Physics, Biology and Medicine, Sep 20, 2017. [PUMA: myown kspaceastronauts iqa] URL

Thomas Küstner, Martin Schwartz, Sergios Gatidis, Nina F. Schwenzer, Holger Schmidt, Bin Yang, Chris Gilliam, Thierry Blu, and Fritz Schick. Local All-Pass Filter (LAP): Efficient Optical Flow-Based Image Registration. Proceedings of the ISMRM Workshop on Motion Correction in MRI and MRS, Cape Town, South Africa, September 2017. [PUMA: myown kspaceastronauts motioncorrection]

Thomas Küstner, Annika Liebgott, Lukas Mauch, Petros Martirosian, Konstantin Nikolaou, Fritz Schick, Bin Yang, and Sergios Gatidis. Automatic reference-free detection and quantification of MR image artifacts in human examinations due to motion. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, Hawaii, USA, April 2017. [PUMA: myown kSpaceAstronauts kspaceastronauts IQA]

Thomas Küstner, Christian Würslin, Martin Schwartz, Hadi Fayad, Thibaut Merlin, Christopher Gilliam, Thierry Blu, Petros Martirosian, Fritz Schick, Bin Yang, Holger Schmidt, and Nina F. Schwenzer. Motion correction on a human PET/MR scanner: Clinical feasibility of a motion correction system in patients – an update report. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, Hawaii, USA, April 2017. [PUMA: myown kSpaceAstronauts PETMR_Moco]

Annika Liebgott, Sergios Gatidis, Petros Martirosian, Fritz Schick, Bin Yang, and Thomas Küstner. ImFEATbox: An MR Image Processing Toolbox for Extracting and Analyzing Features. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, Hawaii, USA, April 2017. [PUMA: myown kSpaceAstronauts IQA]

Thomas Küstner, Philip Wolf, Martin Schwartz, Annika Liebgott, Fritz Schick, Sergios Gatidis, and Bin Yang. An easy-to-use image labeling platform for automatic Magnetic Resonance Image Quality Assessment. Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI), Melbourne, Australia, April 2017. [PUMA: myown kSpaceAstronauts IQA MachineLearning]

Sergios Gatidis, Annika Liebgott, Martin Schwartz, Petros Martirosian, Fritz Schick, Konstantin Nikolaou, Bin Yang, and Thomas Küstner. Automated reference-free assessment of MR image quality using an active learning approach: Comparison of Support Vector Machine versus Deep Neural Network classification. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, Hawaii, USA, April 2017. [PUMA: myown kSpaceAstronauts IQA]

Thomas Küstner, Martin Schwartz, Petros Martirosian, Sergios Gatidis, Ferdinand Seith, Christopher Gilliam, Thierry Blu, Hadi Fayad, Dimitris Visvikis, F. Schick, B. Yang, H. Schmidt, and N.F Schwenzer. MR-based respiratory and cardiac motion correction for PET imaging. Medical Image Analysis, Elsevier, 2017. [PUMA: myown kspaceastronauts motioncorrection PETMR_Moco] URL

Thomas Küstner, Sergios Gatidis, Christian Würslin, Konstantin Nikolaou, Petros Martirosian, Fritz Schick, Bin Yang, Nina F. Schwenzer, and Holger Schmidt. Motion imaging in thoracic and abdominal MRI using a self-navigated Cartesian Compressed Sensing acquisition and reconstruction scheme. Proceedings of the Radiological Society of North America (RSNA), Chicago, USA, November 2016. [PUMA: myown kSpaceAstronauts MotionCorrection]

Sergios Gatidis, Annika Liebgott, Holger Schmidt, Nina F. Schwenzer, Petros Martirosian, Konstantin Nikolaou, Fritz Schick, Bin Yang, and Thomas Küstner. Automated image quality assessment in whole-body MRI. Proceedings of the Radiological Society of North America (RSNA), Chicago, USA, November 2016. [PUMA: myown kSpaceAstronauts IQA MachineLearning]

Thomas Küstner, Christian Würslin, Martin Schwartz, Petros Martirosian, Sergios Gatidis, Konstantin Nikolaou, Fritz Schick, Bin Yang, Nina F. Schwenzer, and Holger Schmidt. Simultaneous in-vivo respiratory and cardiac motion correction system for PET/MR. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Singapore, May 2016. [PUMA: myown kSpaceAstronauts PETMR_Moco]

Thomas Küstner, Martin Schwartz, Annika Kaupp, Petros Martirosian, Sergios Gatidis, Nina F. Schwenzer, Fritz Schick, Holger Schmidt, and Bin Yang. An Active Learning platform for automatic MR image quality assessment. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Singapore, May 2016. [PUMA: myown kSpaceAstronauts IQA MachineLearning]

Hadi Fayad, Holger Schmidt, Thomas Küstner, and Dimitris Visvikis. The use of a MR based respiratory motion model for optimal respiratory motion correction in PET/MR imaging. Proceedings of the PSMR, Cologne, Germany, May 2016. [PUMA: myown kSpaceAstronauts PETMR_Moco]

Martin Schwartz, Thomas Küstner, Christian Würslin, Petros Martirosian, Nina F. Schwenzer, Fritz Schick, Bin Yang, and Holger Schmidt. Image Reconstruction System for Compressed Sensing Retrospective Motion Correction for the Application in Clinical Practice. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Singapore, May 2016. [PUMA: Gadgetron myown kSpaceAstronauts MotionCorrection PETMR_Moco]

Thomas Küstner, Verena Neumann, Martin Schwartz, Christian Würslin, Petros Martirosian, Sergios Gatidis, Nina F. Schwenzer, Fritz Schick, Bin Yang, and Holger Schmidt. An MR Motion Correction toolbox for registration and evaluation. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Singapore, May 2016. [PUMA: myown kSpaceAstronauts MotionCorrection]

Christopher Gilliam, Thomas Küstner, and Thierry Blu. 3D Motion Flow Estimation using Local All-Pass Filters. Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI), Prague, Czech Republic, April 2016. [PUMA: myown kSpaceAstronauts MotionCorrection] URL

Annika Liebgott, Thomas Küstner, Sergios Gatidis, Fritz Schick, and Bin Yang. Active Learning for Magnetic Resonance Image Quality Assessment. Proceedings of the IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), Shanghai, China, March 2016. [PUMA: myown kSpaceAstronauts IQA MachineLearning] URL

Thomas Küstner, Martin Schwartz, Christian Würslin, Petros Martirosian, Nina F. Schwenzer, Bin Yang, and Holger Schmidt. Compressed Sensing LAB: An MR acquisition and reconstruction system. Proceedings of the ISMRM Workshop on Data Sampling and Reconstruction, Sedona, AZ, USA, January 2016. [PUMA: CompressedSensing myown kSpaceAstronauts]

Hadi Fayad, Holger Schmidt, Thomas Küstner, and Dimitris Visvikis. 4D MR and attenuation map generation in PET/MR imaging using 4D PET derived deformation matrices: a feasibility study for lung cancer applications. Journal of nuclear medicine, 2016. [PUMA: myown kSpaceAstronauts PETMR_Moco] URL

Thomas Küstner, Christian Würslin, Martin Schwartz, Petros Martirosian, Sergios Gatidis, Cornelia Brendle, Ferdinand Seith, Fritz Schick, Nina F. Schwenzer, Bin Yang, and Holger Schmidt. Self-navigated 4D Cartesian imaging of periodic motion in the body trunk using partial k-space Compressed Sensing. Magnetic Resonance in Medicine, (78)2:632-644, 2016. [PUMA: myown kSpaceAstronauts MotionCorrection] URL

Thomas Küstner, Christian Würslin, Sergios Gatidis, Petros Martirosian, Konstantin Nikolaou, Nina F. Schwenzer, Fritz Schick, Bin Yang, and Holger Schmidt. MR image reconstruction using a combination of Compressed Sensing and partial Fourier acquisition: ESPReSSo. IEEE Transactions on Medical Imaging, (35)11:2447-2458, 2016. [PUMA: CompressedSensing myown kSpaceAstronauts] URL

Thomas Küstner, Christian Würslin, Sergios Gatidis, Petros Martirosian, Konstantin Nikolaou, Nina F. Schwenzer, Fritz Schick, Bin Yang, and Holger Schmidt. Improving subsampling efficiency for Compressed Sensing MRI. Proceedings of the European Society for Magnetic Resonance in Medicine (ESMRMB), Edinburgh, United Kingdom, October 2015. [PUMA: CompressedSensing myown kSpaceAstronauts]

Sergios Gatidis, M. Scharpf, Petros Martirosian, Ilja Bezrukov, Thomas Küstner, J. Hennenlotter, S. Kruck, Sascha Kaufmann, Christina Schraml, Christian La Fougère, Nina F. Schwenzer, and Holger Schmidt. Combined unsupervised-supervised classification of multiparametric PET/MRI data: Application to prostate cancer. NMR in biomedicine, (28)7:914-22, July 2015. [PUMA: myown kSpaceAstronauts MachineLearning] URL

Thomas Küstner, Christian Würslin, Sergios Gatidis, Petros Martirosian, Nina F. Schwenzer, Bin Yang, and Holger Schmidt. In-vivo MR-derived non-rigid motion correction of simultaneously acquired PET. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Toronto, Canada, June 2015. [PUMA: myown kSpaceAstronauts PETMR_Moco]

Thomas Küstner, Parnia Bahar, Christian Würslin, Sergios Gatidis, Petros Martirosian, Nina F. Schwenzer, Bin Yang, and Holger Schmidt. A new approach for automatic image quality assessment. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Toronto, Canada, June 2015. [PUMA: myown kSpaceAstronauts IQA MachineLearning]

Hadi Fayad, Freddy Odille, Holger Schmidt, Christian Würslin, Thomas Küstner, Jochen Felblinger, and Dimitris Visvikis. The use of a generalized reconstruction by inversion of coupled systems (GRICS) approach for generic respiratory motion correction in PET/MR imaging. Physics in medicine and biology, (60)6:2529-46, March 2015. [PUMA: myown kSpaceAstronauts PETMR_Moco] URL

Thomas Küstner, Christian Würslin, Holger Schmidt, and Bin Yang. Combining Compressed Sensing with Motion Correction in Acquisition and Reconstruction for PET/MR. IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), IEEE, Brisbane, Australia, 2015. [PUMA: CompressedSensing myown kSpaceAstronauts MotionCorrection PETMR_Moco] URL

Thomas Küstner, Christian Würslin, Nina F. Schwenzer, Bin Yang, and Holger Schmidt. Self-Navigated 4D Respiratory Motion Imaging Using ESPReSSo Sampling and Reconstruction. Proceedings of the ISMRM Motion Correction in MRI Workshop, Tromsø, Norway, July 2014. [PUMA: myown kSpaceAstronauts MotionCorrection]

Christian Würslin, Thomas Küstner, Sebastian Bartel, Nina F. Schwenzer, Bin Yang, and Holger Schmidt. A Simple-to-Build and Cost-Efficient MR-Compatible Phantom for the Simulation of Non-Rigid Motion. Proceedings of the ISMRM Motion Correction in MRI Workshop, Tromsø, Norway, July 2014. [PUMA: myown kSpaceAstronauts MotionCorrection]

Thomas Küstner, Sergios Gatidis, Christian Würslin, Nina F. Schwenzer, Holger Schmidt, and Bin Yang. ESPReSSo: A Compressed Sensing partial k-space acquisition and reconstruction. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Milano, Italy, May 2014. [PUMA: CompressedSensing myown kSpaceAstronauts]

Sergios Gatidis, Petros Martirosian, Thomas Küstner, Ilja Bezrukov, M. Scharpf, Christina Schraml, Nina F. Schwenzer, and Holger Schmidt. Combined Unsupervised-Supervised Classification of Multiparametric PET/MRI Imaging Data of the Prostate. Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), Milano, Italy, May 2014. [PUMA: myown kSpaceAstronauts MachineLearning]

Thomas Küstner, Christian Würslin, Nina F. Schwenzer, Holger Schmidt, and Bin Yang. Compressed Sensing Partial Subsampling for Short Echo Time in Echo Planar Imaging. Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI), Beijing, China, April 2014. [PUMA: CompressedSensing myown kSpaceAstronauts]