Publications

Stefania Scheurer, Philipp Reiser, Tim Brünnette, Wolfgang Nowak, Anneli Guthke, und Paul-Christian Bürkner. Uncertainty-Aware Surrogate-based Amortized Bayesian Inference for Computationally Expensive Models. Transactions in Machine Learning Research, Januar 2026. [PUMA: PN2 PN2-7 PN5 EXC2075 updated PN5-6(II)] URL

Jenny Geiger, Fabian Klötzer, Nadine Pollak, Gavin Fullstone, und Markus Rehm. Stochasticity contributes to explaining minority and majority MOMP during apoptosis. Cell Death & Disease, (16)1:893--, 2025. [PUMA: EXC2075 PN2 PN2-1A updated] URL

Stefania Scheurer, Philipp Reiser, Tim Brünette, Wolfgang Nowak, Anneli Guthke, und Paul-Christian Bürkner. Uncertainty-Aware Surrogate-based Amortized Bayesian Inference for Computationally Expensive Models. Transactions on Machine Learning Research, (under review)2025. [PUMA: EXC2075 PN2 PN2-7 PN5 PN5-6(II) inReview]

Philipp Reiser, Javier Enrique Aguilar, Anneli Guthke, und Paul-Christian Bürkner. Uncertainty Quantification and Propagation in Surrogate-based Bayesian Inference. Statistics and Computing, (35)(3):66, 2025. [PUMA: EXC2075 PN2 PN2-7 inReview]

Philipp Kuhn, Sabrina Petralla, Fatemeh Dabbagh, Valentina Pegoretti, Walter Muranyi, Hiroshi Ishikawa, Horst Schroten, Roman Fischer, André Frenzel, Thomas Schirrmann, Markus Rehm, Christian Schwerk, Gert Fricker, Roland Kontermann, und Gavin Fullstone. A pH-sensitive binding modality allows successful transferrin receptor-mediated transcytosis of a bivalent antibody across brain barriers. mAbs, (17)1:2563758--, Taylor & Francis, Dezember 2025. [PUMA: EXC2075 PN2 PN2-1A curated] URL

Torsten Giess, und Jürgen Pleiss. Digitalization of biocatalysis: Best practices to research data management. Methods in Enzymology, Academic Press, 2025. [PUMA: EXC2075 PN2 PN2-6 PN2-6(II) curated] URL

Saied Ramedani, Ebru Kelesoglu, Norman Stutzig, Hendrik Von Tengg‐Kobligk, Keivan Daneshvar Ghorbani, und Tobias Siebert. Quantification of training‐induced alterations in body composition via automated machine learning analysis of MRI images in the thigh region: A pilot study in young females. In Tobias Siebert (Hrsg.), Physiological Reports, (13)3Wiley, Januar 2025. [PUMA: EXC2075 PN2 curated] URL

Tobias B Beigl, Alexander Paul, Thomas P Fellmeth, Dang Nguyen, Lynn Barber, Sandra Weller, Benjamin Schäfer, Bernhard F Gillissen, Walter E Aulitzky, Hans-Georg Kopp, Markus Rehm, David W Andrews, Kristyna Pluhackova, und Frank Essmann. BCL-2 and BOK regulate apoptosis by interaction of their C-terminal transmembrane domains. EMBO Reports, (25)9:3896–3924, Springer Science and Business Media LLC, 2024. [PUMA: EXC2075 PN2 PN2-1(II) PN2-1A PN3 PN3-11 curated] URL

André Tomalka. Eccentric muscle contractions : from single muscle fibre to whole muscle mechanics. Pflügers Archiv, (475):421-435, Springer, 2023. [PUMA: EXC2075 PN2 curated]

Marcelle B.M. Spera, Samir Darouich, Jürgen Pleiss, und Niels Hansen. Influence of water content on thermophysical properties of aqueous glyceline solutions predicted by molecular dynamics simulations. Fluid Phase Equilibria, (592):114324, 2025. [PUMA: EXC2075 PN2 PN2-6 PN2-6(II) PN3 PN3-8 curated] URL

Stephan Malzacher, Dominik Meißner, Jan Range, Zvjezdana Findrik Blažević, Katrin Rosenthal, John M. Woodley, Roland Wohlgemuth, Peter Wied, Bernd Nidetzky, Robert T. Giessmann, Kridsadakorn Prakinee, Pimchai Chaiyen, Andreas S. Bommarius, Johann M. Rohwer, Rodrigo O. M. A. de Souza, Peter J. Halling, Jürgen Pleiss, Carsten Kettner, und Dörte Rother. The STRENDA Biocatalysis Guidelines for cataloguing metadata. Nature Catalysis, (7)12:1245--1249, 2024. [PUMA: PN2 PN2-6(II) curated] URL

Bernd Flemisch, Sibylle Hermann, Melanie Herschel, Dirk Pflüger, Jürgen Pleiss, Jan Range, Sarbani Roy, Makoto Takamoto, und Benjamin Uekermann. Research Data Management in Simulation Science: Infrastructure, Tools, and Applications. Datenbank-Spektrum, (24):97–105, 2024. [PUMA: PN2 PN2-6 curated] URL

Kristin Entrop, Senait Wieske, und Markus Rehm. Why Bax detection in >1400 publications might be flawed. Cell Death & Disease, (15)12:880, 05.12.2024. [PUMA: EXC2075 PN2 PN2-1(II) PN2-1A curated] URL

Jürgen Pleiss. Modeling Enzyme Kinetics: Current Challenges and Future Perspectives for Biocatalysis. Biochemistry, (63)20:2533-2541, American Chemical Society, September 2024. [PUMA: EXC2075 PN2 PN2-6(II) curated] URL

Corinna Coenning, Volker Rieg, Tobias Siebert, und Veit Wank. Impact of contraction intensity and ankle joint angle on calf muscle fascicle length and pennation angle during isometric and dynamic contractions. In Tobias Siebert (Hrsg.), Scientific Reports, (14)1:24929, 22.10.2024. [PUMA: EXC2075 PN2 PN2-8Siebert curated] URL

Sebastian Höpfl, Hans-Michael Tautenhahn, Vincent Wagner, und Nicole Erika Radde. Marginal Percentile Intervals in Bayesian Inference are Overconfident. In Maria Klapa, Kristel Bernaerts, und Alejandro Vignoni (Hrsg.), IFAC-PapersOnLine, (58)23:19–24, Elsevier BV, 2024. [PUMA: EXC2075 PN2A-5 PN2] URL

Joy Armistead, Sebastian Höpfl, Pierre Goldhausen, Andrea Müller-Hartmann, Evelin Fahle, Julia Hatzold, Rainer Franzen, Susanne Brodesser, Nicole E. Radde, und Matthias Hammerschmidt. A sphingolipid rheostat controls apoptosis versus apical cell extrusion as alternative tumour-suppressive mechanisms. Cell Death & Disease, (15)10:746, 14.10.2024. [PUMA: PN2 PN2A-5 EXC2075] URL

Matthew Millard, Fabian Kempter, Norman Stutzig, Tobias Siebert, und Jörg Fehr. Improving the accuracy of musculotendon models for the simulation of active lengthening. In T. Siebert (Hrsg.), 533-541, 2023. [PUMA: EXC2075 PN2 curated] URL

Fabian Kempter, Lorena Lantella, Norman Stutzig, Jörg Fehr, und Tobias Siebert. Role of Rotated Head Postures on Volunteer Kinematics and Muscle Activity in Braking Scenarios Performed on a Driving Simulator. Springer Link, (51):771–782, April 2024. [PUMA: EXC2075 PN2 curated] URL

Matthew Millard, Norman Stutzig, Jörg Fehr, und Tobias Siebert. A benchmark of muscle models to length changes great and small. ScienceDirect Elsevier, September 2024. [PUMA: EXC2075 PN2 curated] URL