Publications

Thomas Ertl, Michael Krone, Stefan Kesselheim, Katrin Scharnowski, Guido Reina, und Christian Holm. Visual Analysis for Space-Time Aggregation of Biomolecular Simulations. In Royal Society for Chemistry (Hrsg.), Faraday Discussions, (169)2014. [PUMA: visus:reina sfb716-d4-ertl biovis visus:kroneml visus:holmcn visus:kesselsn visus:ertl visus sfb716-c5 sfb716-d3 vis-ertl volume-visualisation vis-gis vis(us) 2014 visus:scharnkn] URL

Rajarshi Chakrabarti, Stefan Kesselheim, P. Kosovan, und Christian Holm. Tracer diffusion in a crowded cylindrical channel. Phys Rev E, (87)2013. [PUMA: sfb716 visus:holmcn 2013 visus:kesselsn sfb716-c sfb716-c5] URL

Michael Lahnert, Carsten Burstedde, Christian Holm, Miriam Mehl, Georg Rempfer, und Florian Weik. Towards Lattice-Boltzmann on Dynamically Adaptive Grids - Minimally-Invasive Grid Exchange in ESPResSo. In M. (Hrsg) Papadrakakis, V. (Hrsg) Papadopoulos, G. (Hrsg) Stefanou, und V. (Hrsg) Plevris (Hrsg.), ECCOMAS Congress 2016, VII European Congress on Computational Methods in Applied Sciences and Engineering., (2016)32016. [PUMA: sfb716 visus:holmcn visus:weikfn sfb716-d8 sfb716-c5 visus:rempfegg visus:mehlmm 2016 sfb716-d sfb716-c visus:lahnerml]

Gernot Bauer, Alexander Lange, Nadezhda Gribova, Christian Holm, und Joachim Groß. Three-body effects in triplets of capped gold nanocrystals. Molecular Physics, 2016. [PUMA: sfb716 2016 visus:holmcn visus:grossjm visus:gribovna visus:bauergt sfb716-a7 sfb716-a] URL

Stefan Kesselheim, Marcello Sega, und Christian Holm. The ICC* Algorithm: A fast way to include dielectric boundary effects. Comp. Phys. Comm., 2010. [PUMA: visus:holmcn visus:kesselsn 2010 sfb716-c5] URL

Georg Rempfer, Sascha Ehrhardt, Nadanai Laohakunakorn, Gary B. Davies, Ulrich F. Keyser, Christian Holm, und Joost de Graaf. Selective Trapping of DNA Using Glass Microcapillaries. Langmuir, (32)332016. [PUMA: visus:rempfegg sfb716 2016 visus:holmcn sfb716-c sfb716-c5] URL

Georg Rempfer, Gary B. Davies, Christian Holm, und Joost de Graaf. Reducing spurious flow in simulations of electrokinetic phenomena. J. Chem. Phys., (145)449012016. [PUMA: visus:rempfegg sfb716 2016 visus:holmcn sfb716-c sfb716-c5] URL

Stefan Kesselheim, Wojciech Müller, und Christian Holm. Origin of Current Blockades in Nanopore Translocation Experiments. Physical Review Letters, (112)12014. [PUMA: sfb716 visus:holmcn 2014 visus:kesselsn sfb716-c sfb716-c5] URL

Georg Rempfer, Sascha Ehrhardt, Christian Holm, und Joost de Graaf. Nanoparticle Translocation through Conical Nanopores: A Finite Element Study of Electrokinetic Transport. Macromolecular Theory and Simulations, (25)2016. [PUMA: visus:rempfegg sfb716 2016 visus:holmcn sfb716-c sfb716-c5] URL

Michael Kuron, Georg Rempfer, Florian Schornbaum, Martin Bauer, Christian Godenschwager, Christian Holm, und Joost de Graaf. Moving Charged Particles in Lattice Boltzmann-Based Electrokinetics. J. Chem. Phys, 2016. [PUMA: visus:rempfegg sfb716 2016 visus:holmcn sfb716-c sfb716-c5]

Stefan Kesselheim, und Christian Holm. Modeling DNA in Nanopores. In R. Podgornik, D.S. Dean, A. Naji, und J. Dobnikar (Hrsg.), Electrostatics of Soft and Disordered Media, Pan Stanford, 2013. [PUMA: sfb716 visus:holmcn 2013 visus:kesselsn sfb716-c sfb716-c5]

Sven Bachthaler, Filip Sadlo, Rudolf Weeber, Sofia S. Kantorovich, Christian Holm, und Daniel Weiskopf. Magnetic Flux Topology of 2D Point Dipoles. Computer Graphics Forum, (31)32012. [PUMA: simtech visus:holmcn visus:sadlo 2012 visus sfb716-d5 vis-ertl visus:weiskopf nonscalar-field-vis vis(us) sfbtrr75 visus:bachthsn] URL

Nadezhda Gribova, Christian Holm, und Joachim Groß. Interactions between capped gold nanocrystals: three-body effects. Poster session during Jülich Soft Matter Days 2011 in Gustav-Stresemann-Institut, Bonn, Germany, 2011. [PUMA: sfb716 visus:holmcn visus:grossjm visus:gribovna 2011 sfb716-a7 sfb716-a]

Stefan Kesselheim, Marcello Sega, und Christian Holm. Influence of pore dielectric boundaries on the translocation barrier of DNA.. arXiv:1002.2759v1 cond-mat.soft, 2010. [PUMA: visus:holmcn visus:kesselsn 2010 sfb716-c5] URL

Stefan Kesselheim, Marcello Sega, und Christian Holm. Influence of pore dielectric boundaries on the translocation barrier of DNA. In J. Comp. Theo. Nanosc. (Hrsg.), 2010. [PUMA: visus:holmcn visus:kesselsn 2010 sfb716-c5] URL

Axel Arnold, Olaf Lenz, Stefan Kesselheim, Rudolf Weeber, Florian Fahrenberger, Dominic Röhm, P. Kosovan, und Christian Holm. ESPResSo 3.1 - Molecular Dynamics Software for Coarse-Grained Models. In M. Griebel, und M. A. Schweitzer (Hrsg.), Meshfree Methods for Partial Differential Equations VI, Lecture Notes in Computational Science and Engineering, Springer, 2013. [PUMA: sfb716 visus:holmcn visus:arnoldal 2013 visus:kesselsn visus:roehmdc sfb716-d6] URL

Axel Arnold, Olaf Lenz, Stefan Kesselheim, Rudolf Weeber, Florian Fahrenberger, Dominic Röhm, P. Kosovan, und Christian Holm. ESPResSo 3.1 - Molecular Dynamics Software for Coarse-Grained Models. In M. Griebel, und M.A. Schweitzer (Hrsg.), Lecture Notes in Computational Science and Engineering, Springer, 2012. [PUMA: sfb716 visus:holmcn visus:arnoldal visus:kesselsn sfb716-d 2012 sfb716-c visus:roehmdc sfb716-c5 sfb716-d6]

Axel Arnold, K. Breitsprecher, Florian Fahrenberger, Stefan Kesselheim, Olaf Lenz, und Christian Holm. Efficient algorithms for electrostatic interactions including dielectric contrasts. Entropy, (15)2013. [PUMA: sfb716 visus:holmcn visus:arnoldal 2013 visus:kesselsn sfb716-c visus:fahrenfn sfb716-c5] URL

Stefan Kesselheim, Marcello Sega, und Christian Holm. Effects of dielectric mismatch and chain flexibility on the translocation barriers of charged macromolecules through solid state nanopores. Soft Matter, (8)2012. [PUMA: visus:holmcn visus:kesselsn 2012 sfb716-c5] URL

Gernot Bauer, Alexander Lange, Nadezhda Gribova, Christian Holm, und Joachim Groß. Effective potentials between gold nano crystals–functional dependence on temperature. Molecular Simulation, (41)142015. [PUMA: sfb716 visus:holmcn 2015 visus:grossjm visus:gribovna visus:bauergt sfb716-a7 sfb716-a] URL