Publications

Matthieu Chavent, Bruno Lévy, Michael Krone, Katrin Bidmon, Jean-Philippe Nominé, Thomas Ertl, and Marc Baaden. GPU-powered tools boost molecular visualization. Briefings in Bioinformatics, (12)6Oxford Press, 2011. [PUMA: sfb716-d4-ertl vis-ertl visus:kroneml vis-gis from:mueller vis(us) 2011 visus:ertl visus:bidmon visus] URL

Thomas Ertl, Michael Krone, Stefan Kesselheim, Katrin Scharnowski, Guido Reina, and Christian Holm. Visual Analysis for Space-Time Aggregation of Biomolecular Simulations. In Royal Society for Chemistry (Eds.), Faraday Discussions, (169)2014. [PUMA: visus:reina sfb716-d4-ertl biovis visus:kroneml visus:holmcn visus:kesselsn visus:ertl visus sfb716-c5 sfb716-d3 vis-ertl volume-visualisation vis-gis from:mueller vis(us) 2014 visus:scharnkn] URL

Martin Falk, Michael Krone, and Thomas Ertl. Atomistic Visualization of Mesoscopic Whole-Cell Simulations. EG Workshop on Visual Computing for Biology and Medicine (VCBM), 2012. [PUMA: sfb716-d4-ertl biovis visus:kroneml 2012 visus:falkmn visus:ertl visus vis-ertl vis-gis from:mueller vis(us)] URL

Martin Falk, Michael Krone, and Thomas Ertl. Atomistic Visualization of Mesoscopic Whole-Cell Simulations using Ray-Casted Instancing. Computer Graphics Forum, (32)82013. [PUMA: sfb716-d4-ertl biovis visus:kroneml 2013 visus:falkmn visus:ertl visus vis-ertl vis-gis from:mueller vis(us)] URL

Patrick Gralka, Sebastian Grottel, Joachim Staib, Karsten Schatz, Grzegorz Karol Karch, M. Hirschler, Michael Krone, Guido Reina, S. Gumhold, and Thomas Ertl. 2016 IEEE Scientific Visualization Contest Winner: Visual and Structural Analysis of Point-based Simulation Ensembles. IEEE Computer Graphics & Applications, (38)3:106-117, 2018. [PUMA: visus:reina sfb716-d4-ertl visus:kroneml visus:grottel vis:ertl sfb716-a6 visus:ertl visus megamol sfb716-d3 vis-ertl visus:karchgz 2018 vis-gis from:mueller vis(us) visus:gralkapk]

Patrick Gralka, Sebastian Grottel, Joachim Staib, Karsten Schatz, Grzegorz Karol Karch, M. Hirschler, Michael Krone, Guido Reina, S. Gumhold, and Thomas Ertl. 2016 IEEE Scientific Visualization Contest Winner: Visual and Structural Analysis of Point-based Simulation Ensembles. IEEE Computer Graphics & Applications, (38)3:106-117, 2018. [PUMA: visus:reina sfb716-d4-ertl visus:kroneml visus:grottel from:guidoreina vis:ertl sfb716-a6 visus:ertl visus megamol sfb716-d3 vis-ertl visus:karchgz 2018 vis-gis from:mueller vis(us) visus:gralkapk]

Sebastian Grottel, Michael Krone, Christoph Müller, Guido Reina, and Thomas Ertl. MegaMol – A Prototyping Framework for Particle-based Visualization. IEEE Transactions on Visualization and Computer Graphics, (21)2IEEE, 2015. [PUMA: visus:reina sfb716-d4-ertl biovis visus:kroneml visus:grottel vvand sfb716 visus:ertl visus:mueller visus gigapixel sfb716-d3 vis-ertl vis-gis 2015 from:mueller vis(us)] URL

Sebastian Grottel, Michael Krone, Katrin Scharnowski, and Thomas Ertl. Object-Space Ambient Occlusion for Molecular Dynamics. Proceedings of IEEE Pacific Visualization Symposium 2012, 2012. [PUMA: sfb716-d4-ertl visus:kroneml visus:grottel 2012 visus:ertl visus sfb716-d3 vis-ertl vis-gis from:mueller vis(us) visus:scharnkn] URL

Sebastian Grottel, Guido Reina, Michael Krone, Christoph Müller, and Thomas Ertl. MegaMol - for Fun and Profit. Workshop on Visualization in Practice, 2016. [PUMA: visus:reina sfb716-d4-ertl visus:kroneml visus:grottel visus:ertl visus:mueller visus sfb716-d3 sfb716-d4 vis-ertl vis-gis 2016 from:mueller vis(us)]

Daniel Kauker, Michael Krone, Alexandros Panagiotidis, Guido Reina, and Thomas Ertl. Rendering Molecular Surfaces using Order-Independent Transparency. In Eurographics Association (Eds.), Eurographics Symposium on Parallel Graphics and Visualization (EGPGV), (13)2013. [PUMA: visus:reina sfb716-d4-ertl visus:kroneml visus:kaukerdl 2013 visus:ertl visus sfb716-d3 vis-ertl visus:panagias vis-gis from:mueller vis(us) fetol mcsimvis] URL

Daniel Kauker, Michael Krone, Alexandros Panagiotidis, Guido Reina, and Thomas Ertl. Evaluation of per-pixel linked lists for distributed rendering and comparative analysis. In Fabrizio Lamberti, and Andrea Sanna (Eds.), Computing and Visualization in Science, (15)3Springer Berlin, 2013. [PUMA: visus:reina sfb716-d4-ertl visus:kroneml visus:kaukerdl 2013 visus:ertl visus sfb716-d3 vis-ertl visus:panagias vis-gis from:mueller vis(us) fetol mcsimvis] URL

Michael Krone, Katrin Bidmon, and Thomas Ertl. Interactive Visualization of Molecular Surface Dynamics. IEEE Transactions on Visualization and Computer Graphics (Proceedings Visualization / Information Visualization 2009), (15)62009. [PUMA: sfb716-d4-ertl biovis visus:kroneml visus:ertl visus 2009 vis-ertl vis-gis from:mueller vis(us) visus:bidmon] URL

Michael Krone, Katrin Bidmon, and Thomas Ertl. GPU-based Visualisation of Protein Secondary Structure. Proceedings of TP.CG'08, 2008. [PUMA: sfb716-d4-ertl biovis visus:kroneml visus:ertl visus vis-ertl 2008 vis-gis from:mueller vis(us) visus:bidmon] URL

Michael Krone, Carsten Dachsbacher, and Thomas Ertl. Parallel Computation and Interactive Visualization of Time-varying Solvent Excluded Surfaces. International Conference On Bioinformatics and Computational Biology, (2010)ACM, 2010. [PUMA: sfb716-d4-ertl vis-vc biovis visus:kroneml visus:ertl 2010 visus:dachsbcn visus vis-ertl vis-gis from:mueller vis(us)] URL

Michael Krone, Martin Falk, Sascha Rehm, Jürgen Pleiss, and Thomas Ertl. Interactive Exploration of Protein Cavities. Computer Graphics Forum, (30)32011. [PUMA: sfb716-d4-ertl biovis visus:kroneml 2011 visus:falkmn visus:ertl visus:rehmsa visus vis-ertl sfb716-c1 vis-gis from:mueller vis(us) visus:pleissjn] URL

Michael Krone, Florian Frieß, Katrin Scharnowski, Guido Reina, Silvia Fademrecht, Tobias Kulschewski, Jürgen Pleiss, and Thomas Ertl. Molecular Surface Maps. IEEE Transactions on Visualization and Computer Graphics (Proceedings of the Scientific Visualization 2016), (23)12017. [PUMA: visus:reina sfb716-d4-ertl biovis visus:kroneml sfbtrr161 sfb716-d4-pleiss visus:ertl visus sfb716-d3 sfb716-d4 vis-ertl visus:friessfn sfb716-c1 2017 vis-gis from:mueller vis(us) visus:pleissjn visus:scharnkn] URL

Michael Krone, Florian Frieß, Katrin Scharnowski, Guido Reina, Silvia Fademrecht, Tobias Kulschewski, Jürgen Pleiss, and Thomas Ertl. Molecular Surface Maps. IEEE Transactions on Visualization and Computer Graphics, (23)12017. [PUMA: visus:reina sfb716-d4-ertl biovis visus:kroneml sfbtrr161 sfb716-d4-pleiss visus:ertl visus sfb716-d3 vis-ertl visus:friessfn sfb716-c1 2017 vis-gis from:mueller vis(us) visus:pleissjn visus:scharnkn] URL

Michael Krone, Sebastian Grottel, and Thomas Ertl. Parallel Contour-Buildup Algorithm for the Molecular Surface. Proceedings of IEEE Symposium on Biological Data Visualization (biovis'11), 2011. [PUMA: sfb716-d4-ertl biovis visus:kroneml visus:grottel 2011 visus:ertl visus sfb716-d3 vis-ertl vis-gis from:mueller vis(us)] URL

Michael Krone, Markus Huber, Katrin Scharnowski, Manuel Hirschler, Daniel Kauker, Guido Reina, Ulrich Nieken, Daniel Weiskopf, and Thomas Ertl. Evaluation of Visualizations for Interface Analysis of SPH. EuroVis 2014 Short Papers, (3)2014. [PUMA: visus:reina sfb716-d4-ertl visus:kroneml visus:kaukerdl sfb716-a6 visus:ertl visus sfb716-d5 sfb716-d3 vis-ertl visus:weiskopf volume-visualisation vis-gis from:mueller vis(us) 2014 visus:scharnkn visus:huberms visus:hirschml visus:niekenuh] URL

Michael Krone, Daniel Kauker, Guido Reina, and Thomas Ertl. Visual Analysis of Dynamic Protein Cavities and Binding Sites. IEEE PacificVis - Visualization Notes, (1)2014. [PUMA: visus:reina sfb716-d4-ertl biovis visus:kroneml visus:kaukerdl visus:ertl visus sfb716-d3 vis-ertl vis-gis from:mueller vis(us) 2014] URL