Weakly Labeled Corpora as Silver Standard for Drug-Drug and Protein-Protein Interaction. Proceedings of the Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM) on Language Resources and Evaluation Conference (LREC), Istanbul, Turkey, 2012. [PUMA: ddi drug extraction myown nlp ppi protein relation resources] URL
Committee-based Selection of Weakly Labeled Instances for Learning Relation Extraction. Research in Computing Science, (70):187-197, 2013. [PUMA: distant labeling myown protein recognition relation supervision weak] URL
Improving Distantly Supervised Extraction of Drug-Drug and Protein-Protein Interactions. Proceedings of the Joint Workshop on Unsupervised and Semi-Supervised Learning in NLP, 35-43, Association for Computational Linguistics, Avignon, France, April 2012. [PUMA: bionlp ddi drug interaction myown nlp ppi protein] URL
Learning Protein Protein Interaction Extraction using Distant Supervision. Proceedings of Workshop on Robust Unsupervised and Semisupervised Methods in Natural Language Processing, 25-32, Hissar, Bulgaria, September 2011. [PUMA: distant myown ppi protein supervision] URL
Overview of BioCreative II Gene Mention Recognition. Genome Biology, (9)Suppl 2:S2.2-S2.18, September 2008. [PUMA: bionlp competition gene myown ner protein shared task] URL
Molecular mass as a determinant for nuclear San1-dependent targeting of misfolded cytosolic proteins to proteasomal degradation. FEBS LETTERS, (590)12:1765-1775, WILEY-BLACKWELL, 111 RIVER ST, HOBOKEN 07030-5774, NJ USA, June 2016. [PUMA: San1; Ubr1} control; cytosolic ligase; nucleus; protein proteins; quality ubiquitin {Misfolded]
Characterization of protein quality control components via dual reporter-containing misfolded cytosolic model substrates. ANALYTICAL BIOCHEMISTRY, (515):14-21, ACADEMIC PRESS INC ELSEVIER SCIENCE, 525 B ST, STE 1900, SAN DIEGO, CA 92101-4495 USA, December 2016. [PUMA: Chaperones; Cytosolic Luciferase; Proteasomal beta-isopropylmalate control; degradation; dehydrogenase} protein proteins; quality {Misfolded]
An error model for protein quantification. Bioinformatics, (23)20:2747--2753, Oxford University Press (OUP), September 2007. [PUMA: error model protein] URL
Formation of bacteriophage MS2 infectious units in a cell-free translation system. FEBS LETTERS, (397)2-3:143-148, ELSEVIER SCIENCE BV, PO BOX 211, 1000 AE AMSTERDAM, NETHERLANDS, November 1996. [PUMA: myown protein proteinsynthesis]
Model-based inference of gene expression dynamics from sequence information. In Nielsen, J (Eds.), BIOTECHNOLOGY FOR THE FUTURE, (100):89-179, SPRINGER-VERLAG BERLIN, HEIDELBERGER PLATZ 3, D-14197 BERLIN, GERMANY, 2005. [PUMA: and biosynthesis; degradation} mRNA modeling myown protein simulation; transcription; translation; {dynamic] URL
A D-specific hydantoin amidohydrolase: properties of the metalloenzyme purified from Arthrobacter crystallopoietes. JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, (6)3:387-397, ELSEVIER SCIENCE BV, PO BOX 211, 1000 AE AMSTERDAM, NETHERLANDS, March 1999. [PUMA: acid} amidase; amino cyclic dihydropyrimidinase; hydantoin; myown protein purification; urease; {hydantoinase;] URL
Far-infrared spectroscopy on free-standing protein films under defined temperature and hydration control. The Journal of Chemical Physics, (136)7:075102, February 2012. [PUMA: films free-standing protein]
Protein dynamics in the THz-range. IRMMW 2004/THz 2004: 739, 2004. [PUMA: dynamics protein]
Aqueous ionic liquids in comparison with standard co-solutes - Differences and common principles in their interaction with protein and DNA structures. Biophysical Reviews, (10)3:809-824, June 2018. [PUMA: chemistry dna physical protein sfb716 sfb716-c8 simulation vis(us) visus:smiatejs] URL
Influence of the Compatible Solute Ectoine on the Local Water Structure: Implications for the Binding of the Protein G5P to DNA. Journal of Physical Chemistry B, (119)49:15212--15220, 2015. [PUMA: 2015 chemistry dna dynamics molecular physical protein sfb716 sfb716-c8 simulation vis(us) visus:smiatejs]
Binding of solvent molecules to a protein surface in binary mixtures follows a competitive Langmuir model. Langmuir, (32):8960-8968, 2016. [PUMA: chemistry dynamics molecular physical protein sfb716 sfb716-c1 simulation vis(us) visus:pleissjn] URL
Protein design in metabolic engineering and synthetic biology. Curr.Opin.Biotech., (22):1-7, 2011. [PUMA: 2011 chemistry dynamics molecular physical protein sfb716 simulation vis(us) visus:pleissjn] URL
Interactive exploration of protein cavities. Comput. Graph. Forum, (30):673-682, 2011. [PUMA: protein sfb716 sfb716-d4 simulation vis(us) visus:ertlts visus:kroneml] URL
Interactive extraction and tracking of biomolecular surface features. Comput. Graph. Forum, (32):331-340, 2013. [PUMA: protein sfb716 sfb716-d4 simulation vis(us) visus:ertlts visus:kroneml] URL
The dinuclear CuA center in cytochrome c oxidase and N2O reductase. A metal-metal bond in biology?. Angewandte Chemie, International Edition in English, (34)7:771--773, 1995. [PUMA: center copper dinuclear protein review]
The dinuclear CuA center in cytochrome c oxidase and N2O reductase. A metal-metal bond in biology?. Angewandte Chemie, International Edition in English, (34)7:771--773, 1995. [PUMA: center copper dinuclear protein review]