Alcohols on the Rocks: Solid-State Formation in a H₃CC≣CH + OH Cocktail under Dark Cloud Conditions. ACS Earth Space Chem., (3)6:986-999, 2019. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
The Case of H₂C₃O Isomers, Revisited: Solving the Mystery of the Missing Propadienone. Astrophys. J., (878)2:80, 2019. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Formation of Acetaldehyde on CO-Rich Ices. ACS Earth Space Chem., (3)6:958-963, 2019. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Unfolding of DNA by co-solutes: insights from Kirkwood--Buff integrals and transfer free energies. Eur. Phys. J. - S. T., (227)14:1665--1679, 2019. [PUMA: chemie from:alexanderdenzel imported kaestner kästner stuttgart theochem theoretische] URL
Particle methods in natural science and engineering. Eur. Phys. J. - S. T., (227)14:1493--1499, 2019. [PUMA: chemie from:alexanderdenzel imported kaestner kästner stuttgart theochem theoretische] URL
Silicate-mediated interstellar water formation: a theoretical study. Monthly Notices of the Royal Astronomical Society, (482)4:5389-5400, November 2019. [PUMA: chemie from:alexanderdenzel imported kaestner kästner stuttgart theochem theoretische] URL
Asymmetric Carboxycyanation of Aldehydes by Cooperative AlF-/Onium Salt Catalysts: from Cyanoformate to KCN as Cyanide Source. Chem. Eur. J., (25):1515-1524, 2019. [PUMA: EXC310 chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
The Lewis Pair Polymerization of Lactones Using Metal Halides and N-Heterocyclic Olefins: Theoretical Insights. Molecules, (23):432, 2018. [PUMA: chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
Calculation of Reaction Rate Constants in the Canonical and Microcanonical Ensemble. J. Chem. Theory Comput., (14):5489-5498, 2018. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Unraveling the Nature of the Catalytic Power of Fluoroacetate Dehalogenase. ChemCatChem, (10):1052, 2018. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Tunnelling dominates the reactions of hydrogen atoms with unsaturated alcohols and aldehydes in the dense medium. Astron. Astrophys., (617):A25, 2018. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Instanton rate constant calculations using interpolated potential energy surfaces in nonredundant, rotationally and translationally invariant coordinates. J. Comput. Chem., (40):866-874, 2019. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Reaction Rates and Kinetic Isotope Effects of H₂ + OH → H₂O + H. J. Chem. Phys., (144):174303, 2016. [PUMA: chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
Locating instantons in many degrees of freedom. J. Chem. Theory Comput., (7):690, 2011. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Bridging the gap between thermodynamic integration and umbrella sampling provides a novel analysis method: ``Umbrella Integration''. J. Chem. Phys., (123):144104, 2005. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
HOCO formation in astrochemical environments by radical-induced H-abstraction from formic acid. Mon. Not. R. Astron. Soc., (482)1:293-300, 2019. [PUMA: EXC310 chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
Handbook of Materials Modeling. In R. Catlow, H. Shercliff, and S. Yip (Eds.), Kluwer Academic Publishers, 2004. [PUMA: chemie from:alexanderdenzel imported kaestner kästner stuttgart theochem theoretische]
ChemShell—a modular software package for QM/MM simulations. WIREs Comput. Mol. Sci., (4):101-110, 2014. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Umbrella Sampling. WIREs Comput. Mol. Sci., (1):932, 2011. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
QM/MM Free-Energy Perturbation Compared to Thermodynamic Integration and Umbrella Sampling: Application to an Enzymatic Reaction. J. Chem. Theory Comput., (2):452, 2006. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
N₂ binding to the FeMo-cofactor of nitrogenase. Z. Anorg. Allg. Chem., (641):118, 2015. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Potential energy surface interpolation with neural networks for instanton rate calculations. J. Chem. Phys., (148):094106, 2018. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
DL-FIND: an Open-Source Geometry Optimizer for Atomistic Simulations. J. Phys. Chem. A, (113):11856-11865, 2009. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
The Path Length Determines the Tunneling Decay of Substituted Carbenes. Chem. Eur. J., (19):8207-8212, 2013. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Atom Tunneling in the Hydroxylation Process of Taurine/α-Ketoglutarate Dioxygenase Identified by Quantum Mechanics/Molecular Mechanics Simulations. J. Phys. Chem. B, (121):5347-5354, 2017. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Activation and Protonation of Dinitrogen at the FeMo-Cofactor of Nitrogenase. J. Chem. Phys., (123):074306, 2005. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Synergistic Substrate and Oxygen Activation in Salicylate Dioxygenase Revealed by QM/MM Simulations. Angew. Chem. Int. Ed., (55)3:1168-1172, 2016. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
The Fragmentation–Recombination Mechanism of the Enzyme Glutamate Mutase Studied by QM/MM Simulations. J. Am. Chem. Soc., (133):10195, 2011. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Analysis of the statistical error in umbrella sampling simulations by umbrella integration. J. Chem. Phys., (124):234106, 2006. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Ectodomain orientation, conformational plasticity and oligomerization of ErbB1 receptors investigated by molecular dynamics. J. Struct. Biol., (167):117, 2009. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Adaptive Integration Grids in Instanton Theory Improve the Numerical Accuracy at Low Temperature. J. Chem. Phys., (134):184107, 2011. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Hydrogen-Atom Tunneling Could Contribute to H₂ Formation in Space. Angew. Chem. Int. Ed., (49):7350-7352, 2010. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Theoretical exploration of seleno and tellurophenols as promising alternatives to sulfur ligands for anchoring to gold (111) materials. RSC Adv., (6)6:4458-4468, The Royal Society of Chemistry, 2016. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Ammonia Production at the FeMo Cofactor of Nitrogenase: Results from Density Functional Theory. J. Am. Chem. Soc., (129):2998, 2007. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Influence of the Environment on the Oxidative Deamination of p-Substituted Benzylamines in Monoamine Oxidase. J. Phys. Chem. B, (119):3678-3686, 2015. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
The Stabilizing Effects in Gold Carbene Complexes. Angew. Chem. Int. Ed., (54):10336-10340, 2015. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Are different stoichiometries feasible for complexes between lymphotoxin-alpha and tumor necrosis factor receptor 1?. BMC Struct. Biol., (12):8, 2012. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Nitrogen Binding to the FeMo-Cofactor of Nitrogenase. J. Am. Chem. Soc., (125):15772, 2003. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Theory and Simulation of Atom Tunneling in Chemical Reactions. WIREs Comput. Mol. Sci., (4):158, 2014. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Quantum tunneling during interstellar surface-catalyzed formation of water: the reaction H + H₂O₂ → H₂O + OH. Phys. Chem. Chem. Phys., (18):33021-33030, 2016. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
A new Tabu-Search based algorithm for solvation of proteins. J. Chem. Theory Comput., (9):814, 2013. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Umbrella integration with higher-order correction terms. J. Chem. Phys., (136):234102, 2012. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Gaussian process regression for geometry optimization. J. Chem. Phys., (148)9:094114, 2018. [PUMA: chemie denzel from:alexanderdenzel imported kaestner kästner stuttgart theochem theoretische] URL
Gaussian Process Regression for Transition State Search. J. Chem. Theory Comput., (14):5777–5786, 2018. [PUMA: chemie denzel from:alexanderdenzel imported kaestner kästner stuttgart theochem theoretische] URL
Atom Tunneling in the Water Formation Reaction H₂ + OH → H₂O + H on an Ice Surface. ACS Earth Space Chem., (1):399-410, 2017. [PUMA: chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
An Anionic Molybdenum Amidato Bisalkyl Alkylidyne Complex. J. Organomet. Chem., (799):223-225, 2015. [PUMA: chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
Kinetic Isotope Effects Calculated with the Instanton Method. J. Comput. Chem., (32):3456, 2011. [PUMA: chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
A Quadratically-Converging Nudged Elastic Band Optimizer. J. Chem. Theory Comput., (9):3498-3504, 2013. [PUMA: chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
Double Regioselective Asymmetric C-Allylation of Isoxazolinones: Iridium-Catalyzed N-Allylation Followed by an Aza-Cope Rearrangement. Angew. Chem. Int. Ed., (57)5:1404-1408, 2018. [PUMA: chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
Fe or Fe–NO Catalysis? A Quantum Chemical Investigation of the [Fe(CO)₃(NO)]⁻-Catalyzed Cloke—Wilson Rearrangement. Chem. Eur. J., (20):7254-7257, 2014. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Tunneling Reaction Kinetics for the Hydrogen Abstraction Reaction H + H₂S → H₂ + HS in the Interstellar Medium. J. Phys. Chem. A, (121):9736-9741, 2017. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Hydrogen transfer reactions of interstellar complex organic molecules. Mon. Not. R. Astron. Soc., (479)2:2007-2015, 2018. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
How maltose influences structural changes to bind to maltose-binding protein: Results from umbrella sampling simulation. Proteins, (81):185, 2013. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Formation of the prebiotic molecule NH₂CHO on astronomical amorphous solid water surfaces: accurate tunneling rate calculations. Phys. Chem. Chem. Phys., (18):29278-29285, 2016. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
An algorithm to find minimum free-energy paths using umbrella integration. J. Chem. Phys., (137):034105, 2012. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Umbrella integration in two or more reaction coordinates. J. Chem. Phys., (131):034109, 2009. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Finite-temperature effects in enzymatic reactions – Insights from QM/MM free-energy simulations. Can. J. Chem., (87):1322, 2009. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Model for Acetylene Reduction by Nitrogenase Derived from Density Functional Theory. Inorg. Chem., (44):4568, 2005. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Rate constants from instanton theory via a microcanonical approach. J. Chem. Phys., (146):074105, AIP Publishing, 2017. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Towards an Understanding of the Workings of Nitrogenase from DFT Calculations.. ChemPhysChem, (6):1724, 2005. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Carbonylation of alkyl halides with [Fe(CO)₃(NO)]⁻: in silico identification of a common intermediate. Dalton Trans., (42):7519, 2013. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Exploiting QM/MM Capabilities in Geometry Optimization: a Microiterative Approach Using Electrostatic Embedding. J. Chem. Theory Comput., (3):1064, 2007. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
An embedded cluster study of the formation of water on interstellar dust grains. Phys. Chem. Chem. Phys., (11):5431, 2009. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Influence of Surface and Bulk Water Ice on the Reactivity of a Water-forming Reaction. Astrophys. J., (846):43, 2017. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Tunneling Above the Crossover Temperature. J. Phys. Chem. A, (118):78, 2014. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Superlinearly converging dimer method for transition state search. J. Chem. Phys., (128):014106, 2008. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Reaction Mechanism of the Bicopper Enzyme Peptidylglycine-alpha-Hydroxylating Monooxygenase. J. Biol. Chem., (289):13726-13738, 2014. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Comparison of classical reaction paths and tunneling paths studied with the semiclassical instanton theory. Phys. Chem. Chem. Phys., (19)34:23085-23094, The Royal Society of Chemistry, 2017. [PUMA: chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
Atom tunnelling in the reaction NH₃⁺ + H₂ → NH₄⁺ + H and its astrochemical relevance. Faraday Disc., (195):69-80, 2016. [PUMA: chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
High Oxidation State Molybdenum N-Heterocyclic Carbene Alkylidyne Complexes: Synthesis, Mechanistic Studies, and Reactivity. Chemistry — A European Journal, (23)61:15484-15490, 2017. [PUMA: chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
Dual-Level Approach to Instanton Theory. J. Chem. Theory Comput., (14):1865-1872, 2018. [PUMA: chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
An Aluminum Fluoride Complex with an Appended Ammonium Salt as an Exceptionally Active Cooperative Catalyst for the Asymmetric Carboxycyanation of Aldehydes. Angew. Chem. Int. Ed., (56):4056–4060, 2017. [PUMA: chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
Atom-Tunneling in Chemistry. Angew. Chem. Int. Ed., (55):5400-5413, 2016. [PUMA: chemie from:alexanderdenzel imported kaestner kästner meisner stuttgart theochem theoretische] URL
Role of Tunneling in the Enzyme Glutamate Mutase. J. Phys. Chem. B, (116):13682, 2012. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Nudged-elastic band used to find reaction coordinates based on the free energy. J. Chem. Phys., (140):074109, 2014. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
The ribosome catalyses peptide bond formation by providing high ionic strength. Mol. Phys., (108):293, 2010. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Reaction Mechanism of Monoamine Oxidase from QM/MM Calculations. J. Phys. Chem. B, (117):14238-14246, 2013. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Projector augmented wave method: ab initio molecular dynamics with full wave functions. Bull. Mater. Sci., (26):33, 2003. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Averaging Techniques for Reaction Barriers in QM/MM Simulations. ChemPhysChem, (15):3264-3269, 2014. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Importance of tunneling in H-abstraction reactions by OH radicals. The case of CH₄ + OH studied through isotope-substituted analogs. Astron. Astrophys., (599):A132, 2017. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Human Epidermal Growth Factor Receptor (EGFR) Aligned on the Plasma Membrane Adopts Key Features of Drosophila EGFR Asymmetry. Mol. Cell. Biol., (31):2241, 2011. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem]
Gold(I) vinylidene complexes as reactive intermediates and their tendency to pi-backbond. Chem. Eur. J., (22):2892-2895, 2016. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Deuterium Enrichment of Interstellar Methanol Explained by Atom Tunneling. J. Phys. Chem. A, (115):10767, 2011. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Tunneling rate constants for H₂CO + H on amorphous solid water surfaces. Astrophys. J., (850):118, 2017. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL
Hydrogenation and Deuteration of C₂H₂ and C₂H₄ on Cold Grains: A Clue to the Formation Mechanism of C₂H₆ with Astronomical Interest. Astrophys. J., (837):155, 2017. [PUMA: chemie imported kaestner from:alexanderdenzel kästner theoretische stuttgart theochem] URL