Publications

Morris Degen, José Carlos Santos, Kristyna Pluhackova, Gonzalo Cebrero, Saray Ramos, Gytis Jankevicius, Ella Hartenian, Undina Guillerm, Stefania A. Mari, Bastian Kohl, Daniel J. Müller, Paul Schanda, Timm Maier, Camilo Perez, Christian Sieben, Petr Broz, and Sebastian Hiller. Structural basis of NINJ1-mediated plasma membrane rupture in cell death. Nature, (618)7967:1065--1071, Jun 1, 2023. [PUMA: myown PN3-11 simtech pn3 peerreviewed updated exc2075] URL

Johann Wachlmayr, Gotthold Fläschner, Kristyna Pluhackova, Walter Sandtner, Christine Siligan, and Andreas Horner. Entropic barrier of water permeation through single-file channels. Communications Chemistry, (6)1:135, Jun 29, 2023. [PUMA: myown PN3-11 CRC1333 simtech pn3 peerreviewed updated exc2075] URL

Xiang Xu, Xi Zhang, Andrei Ruban, Siegfried Schmauder, and Blazej Grabowski. Strong impact of spin fluctuations on the antiphase boundaries of weak itinerant ferromagnetic Ni3Al. Acta Materialia, (255):118986, Elsevier BV, August 2023. [PUMA: myown simtech pn3 peerreviewed exc2075] URL

Marvin Schmitt, Stefan T. Radev, and Paul-Christian Bürkner. Meta-Uncertainty in Bayesian Model Comparison. Proceedings of The 26th International Conference on Artificial Intelligence and Statistics, (206):11--29, PMLR, 2023. [PUMA: postPrint graduateSchool SimTech graduateschool peerReviewed pn6 prePrint EXC2075 exc2075] URL

Benjamin Weder, Johanna Barzen, Martin Beisel, and Frank Leymann. Analysis and Rewrite of Quantum Workflows: Improving the Execution of Hybrid Quantum Algorithms. Proceedings of the 12th International Conference on Cloud Computing and Services Science (CLOSER 2022), 38--50, SciTePress, April 2022. [PUMA: myown simtech pn7 peerreviewed postprint exc2075] URL

Benjamin Weder, Johanna Barzen, Frank Leymann, and Daniel Vietz. Quantum Software Development Lifecycle. In Manuel A. Serrano, Ricardo Pérez-Castillo, and Mario Piattini (Eds.), Quantum Software Engineering, 61--83, Springer International Publishing, October 2022. [PUMA: myown simtech pn7 peerreviewed postprint exc2075] URL

Benjamin Weder, Johanna Barzen, Frank Leymann, Marie Salm, and Karoline Wild. QProv: A provenance system for quantum computing. IET Quantum Communication, (2)4:171--181, Institution of Engineering and Technology (IET), June 2021. [PUMA: myown simtech pn7 peerreviewed postprint exc2075] URL

Nikolaus Gössweiner-Mohr, Christine Siligan, Kristyna Pluhackova, Linnea Umlandt, Sabina Koefler, Natasha Trajkovska, and Andreas Horner. The Hidden Intricacies of Aquaporins: Remarkable Details in a Common Structural Scaffold. Small, (18)31:2202056, 2022. [PUMA: myown PN3-11 simtech PN3 peerReviewed EXC2075 updated] URL

Kristyna Pluhackova, Valentin Schittny, Paul-Christian Bürkner, Christine Siligan, and Andreas Horner. Multiple pore lining residues modulate water permeability of GlpF. Protein Science, (31)10:e4431, 2022. [PUMA: myown PN3-11 simtech PN3 peerReviewed PN6 PN6-7 EXC2075 updated] URL

Viktoria Korn, and Kristyna Pluhackova. Not sorcery after all: Roles of multiple charged residues in membrane insertion of gasdermin-A3. Frontiers in Cell and Developmental Biology, (10)2022. [PUMA: myown PN3-11 PN3 SimTech peerReviewed EXC2075 updated] URL

Birgit Hillebrecht, and Benjamin Unger. Certified machine learning: A posteriori error estimation for physics-informed neural networks. 2022 International Joint Conference on Neural Networks (IJCNN), 1-8, July 2022. [PUMA: myown PN4 SimTech peerReviewed from:bhillebrecht EXC2075]

Gleb Tkachev, Steffen Frey, and Thomas Ertl. S4: Self-Supervised learning of Spatiotemporal Similarity. IEEE Transactions on Visualization and Computer Graphics, 2021. [PUMA: myown simtech peerReviewed vis(us) pn6 visus:ertl visus:tkachegb EXC2075 visus from:gtkachev visus:freysn]

Benjamin Weder, Johanna Barzen, Frank Leymann, and Marie Salm. Automated Quantum Hardware Selection for Quantum Workflows. Electronics, (10)8MDPI, April 2021. [PUMA: myown simtech from:benjamin.weder pn7 peerreviewed postprint exc2075] URL

Kálmán Képes, Frank Leymann, Benjamin Weder, and Karoline Wild. SiDD: The Situation-Aware Distributed Deployment System. In Hakim Hacid, Fatma Outay, Hye-young Paik, Amira Alloum, Marinella Petrocchi, Mohamed Reda Bouadjenek, Amin Beheshti, Xumin Liu, and Abderrahmane Maaradji (Eds.), Service-Oriented Computing -- ICSOC 2020 Workshops, 72--76, Springer International Publishing, 2021. [PUMA: simtech from:benjamin.weder pn7 peerreviewed postprint exc2075]

M. Zimmermann, U. Breitenbücher, K. Képes, F. Leymann, and B. Weder. Data Flow Dependent Component Placement of Data Processing Cloud Applications. 2020 IEEE International Conference on Cloud Engineering (IC2E), 83-94, April 2020. [PUMA: myown postPrint simtech from:benjamin.weder pn7 peerreviewed exc2075] URL

Benjamin Weder, Johanna Barzen, Frank Leymann, Marie Salm, and Daniel Vietz. The Quantum Software Lifecycle. Proceedings of the 1st ACM SIGSOFT International Workshop on Architectures and Paradigms for Engineering Quantum Software (APEQS 2020), 2--9, ACM, November 2020. [PUMA: myown simtech from:benjamin.weder pn7 peerreviewed postprint exc2075] URL

Marie Salm, Johanna Barzen, Frank Leymann, Benjamin Weder, and Karoline Wild. Automating the Comparison of Quantum Compilers for Quantum Circuits. Proceedings of the 15th Symposium and Summer School on Service-Oriented Computing (SummerSOC 2021), 64-80, Springer, 2021. [PUMA: myown simtech from:benjamin.weder pn7 peerreviewed postprint exc2075] URL

Gleb Tkachev, Steffen Frey, and Thomas Ertl. Local Prediction Models for Spatiotemporal Volume Visualization. IEEE Transactions on Visualization and Computer Graphics, 2019. [PUMA: simtech peerReviewed vis(us) pn6 visus:ertl visus:tkachegb EXC2075 visus from:gtkachev visus:freysn] URL

Marie Salm, Johanna Barzen, Frank Leymann, and Benjamin Weder. About a Criterion of Successfully Executing a Circuit in the NISQ Era: What $wd 1/\epsilon_eff$ Really Means. Proceedings of the 1st ACM SIGSOFT International Workshop on Architectures and Paradigms for Engineering Quantum Software, ACM, November 2020. [PUMA: myown simtech from:benjamin.weder pn7 peerreviewed postprint exc2075] URL

B. Weder, U. Breitenbücher, F. Leymann, and K. Wild. Integrating Quantum Computing into Workflow Modeling and Execution. 2020 IEEE/ACM 13th International Conference on Utility and Cloud Computing (UCC), 279-291, December 2020. [PUMA: simtech from:benjamin.weder pn7 peerreviewed postprint exc2075] URL