Publications

Michael Krone, Karsten Schatz, Nora Hieronymus, Christoph Müller, Michael Becher, Tina Barthelmes, April Cooper, Steffen Currle, Patrick Gralka, Marcel Hlawatsch, Lisa Pietrzyk, Tobias Rau, Guido Reina, Rene Trefft, and Thomas Ertl. From Visualization Research to Public Presentation - Design and Realization of a Scientific Exhibition. Proceedings of SIGRAD 2017, 2017. [PUMA: visus:reina sfb716-d4-ertl visus:hlawatml visus:kroneml simtech visus:rauts sfb716-c6 visus:mueller visus:schatzkn megamol sfb716-ö sfb716-d4 2017 visus:hieronna]

Subhendu Roy, and Johannes Kästner. Catalytic Mechanism of Salicylate Dioxygenase: QM/MM Simulations Reveal the Origin of Unexpected Regioselectivity of the Ring Cleavage. Chemistry A European Journal, (23)37:8949-8962, July 2017. [PUMA: sfb716 vis(us) chemistry simulation visus:kaestnjs sfb716-c6 physical] URL

Sonia Alvarez-Barcia, and Johannes Kästner. Atom Tunneling in the Hydroxylation Process of Taurine/alpha-Ketoglutarate Dioxygenase Identified by Quantum Mechanics/Molecular Mechanics Simulations. JOURNAL OF PHYSICAL CHEMISTRY B, (121)21:5347-5354, AMER CHEMICAL SOC, June 2017. [PUMA: 2017 sfb716 molecular vis(us) chemistry simulation simulations mechanics visus:kaestnjs sfb716-c6 physical] URL

April M. Cooper, Philipp P. Hallmen, and Johannes Kästner. Potential energy surface interpolation with neural networks for instanton rate calculations. The Journal of Chemical Physics, (148)094106February 2018. [PUMA: 2018 sfb716 vis(us) chemistry simulation visus:kaestnjs sfb716-c6 physical] URL

Michael Krone, Karsten Schatz, Nora Hieronymus, Christoph Müller, Michael Becher, Tina Barthelmes, April Cooper, Steffen Currle, Patrick Gralka, Marcel Hlawatsch, Lisa Pietrzyk, Tobias Rau, Guido Reina, Rene Trefft, and Thomas Ertl. From Visualization Research to Public Presentation - Design and Realization of a Scientific Exhibition. Proceedings of SIGRAD 2017, 2017. [PUMA: sfb716-d4-ertl visus:hlawatml visus:kroneml simtech visus:rauts visus:mueller visus:schatzkn sfb716-d3 visus:bartheta sfb716-d4 2017 vis(us) visus:gralkapk visus:hieronna visus:reina visus:ertl sfb716-c6 visus sfb716-ö vis-ertl vis-gis]

Michael Krone, Karsten Schatz, Nora Hieronymus, Christoph Müller, Michael Becher, Tina Barthelmes, April Cooper, Steffen Currle, Patrick Gralka, Marcel Hlawatsch, Lisa Pietrzyk, Tobias Rau, Guido Reina, Rene Trefft, and Thomas Ertl. From Visualization Research to Public Presentation - Design and Realization of a Scientific Exhibition. Proceedings of SIGRAD 2017, 2017. [PUMA: visus:reina sfb716-d4-ertl myown visus:hlawatml visus:kroneml simtech visus:rauts visus:ertl sfb716-c6 visus:mueller visus visus:schatzkn sfb716-ö sfb716-d3 sfb716-d4 vis-ertl 2017 vis-gis from:mueller vis(us) visus:gralkapk visus:hieronna]

Johannes Kästner, and Subhendu Roy. Synergistic Substrate and Oxygen Activation in Salicylate Dioxygenase Revealed by QM/MM Simulations. Angewandte Chemie International Edition, (55)32016. [PUMA: visus:roysu sfb716 2016 sfb716-c visus:kaestnjs sfb716-c6] URL

Johannes Kästner, and Subhendu Roy. Synergistic Substrate and Oxygen Activation in Salicylate Dioxygenase Revealed by QM/MM Simulations. Angewandte Chemie International Edition, (55)32016. [PUMA: visus:roysu sfb716 2016 from:mueller vis(us) sfb716-c visus:kaestnjs sfb716-c6] URL

Matthias Bohner. Using umbrella integration to find minimum free energy paths. 2014. [PUMA: sfb716 visus:bohnerms 2014 sfb716-c sfb716-c6]

Matthias Bohner. Using umbrella integration to find minimum free energy paths. 2014. [PUMA: sfb716 from:mueller visus:bohnerms vis(us) 2014 sfb716-c sfb716-c6]

Matthias Bohner, Johannes Zeman, Jens Smiatek, Axel Arnold, and Johannes Kästner. Nudged-elastic band used to find reaction coordinates based on the free energy. J. Chem. Phys., (140)741092014. [PUMA: sfb716 from:mueller visus:bohnerms visus:arnoldal vis(us) 2014 visus:kaestnjs sfb716-c6 sfb716-d6] URL

Matthias Bohner, Johannes Zeman, Jens Smiatek, Axel Arnold, and Johannes Kästner. Nudged-elastic band used to find reaction coordinates based on the free energy. J. Chem. Phys., (140)741092014. [PUMA: sfb716 visus:bohnerms visus:arnoldal 2014 visus:kaestnjs sfb716-c6 sfb716-d6] URL

Matthias Bohner, Jan Meisner, and Johannes Kästner. A Quadratically-Converging Nudged Elastic Band Optimizer. Journal of Chemical Theory and Computation, 2013. [PUMA: sfb716 visus:bohnerms 2013 sfb716-c visus:kaestnjs sfb716-c6] URL

Matthias Bohner, Jan Meisner, and Johannes Kästner. A Quadratically-Converging Nudged Elastic Band Optimizer. Journal of Chemical Theory and Computation, 2013. [PUMA: sfb716 from:mueller visus:bohnerms vis(us) 2013 sfb716-c visus:kaestnjs sfb716-c6] URL

Matthias Bohner, and Johannes Kästner. An algorithm to find minimum free-energy paths using umbrella integration. Journal of Chemical Physics, (137)2012. [PUMA: sfb716 from:mueller visus:bohnerms vis(us) 2012 visus:kaestnjs sfb716-c6] URL

Matthias Bohner, and Johannes Kästner. An algorithm to find minimum free-energy paths using umbrella integration. Journal of Chemical Physics, (137)2012. [PUMA: sfb716 visus:bohnerms 2012 visus:kaestnjs sfb716-c6] URL

Johannes Kästner. Umbrella Integration with Higher-Order Correction Terms. Journal of Chemical Physics, (136)2012. [PUMA: sfb716 2012 visus:kaestnjs sfb716-c6] URL

Johannes Kästner. Umbrella Integration with Higher-Order Correction Terms. Journal of Chemical Physics, (136)2012. [PUMA: sfb716 from:mueller vis(us) 2012 visus:kaestnjs sfb716-c6] URL

Johannes Kästner. Umbrella sampling. Wiley Interdisciplinary Reviews: Computational Molecular Science, (1)2011. [PUMA: 2011 visus:kaestnjs sfb716-c6] URL

Johannes Kästner. Umbrella sampling. Wiley Interdisciplinary Reviews: Computational Molecular Science, (1)2011. [PUMA: from:mueller vis(us) 2011 visus:kaestnjs sfb716-c6] URL