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CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures., , , , , , , , , and 5 other author(s). Bioinformatics, 30 (18): 2684-2685 (2014)HotSpot Wizard 2.0: automated design of site-specific mutations and smart libraries in protein engineering., , , , , , and . Nucleic Acids Research, 44 (Webserver-Issue): W479-W487 (2016)FireProt: Energy- and Evolution-Based Computational Design of Thermostable Multiple-Point Mutants., , , , , , , , , and . PLoS Computational Biology, (2015)Mechanism-Based Discovery of Novel Substrates of Haloalkane Dehalogenases Using in Silico Screening., , , , and . Journal of Chemical Information and Modeling, 55 (1): 54-62 (2015)CAVER: Algorithms for Analyzing Dynamics of Tunnels in Macromolecules., , , , , and . IEEE/ACM Trans. Comput. Biology Bioinform., 13 (3): 505-517 (2016)Evolutionary Analysis As a Powerful Complement to Energy Calculations for Protein Stabilization, , , , , , , , , and 2 other author(s). ACS catalysis, 8 (10): 9420-9428 (2018)CAVER 3.0: A Tool for the Analysis of Transport Pathways in Dynamic Protein Structures., , , , , , , , , and 3 other author(s). PLoS Computational Biology, (2012)PredictSNP2: A Unified Platform for Accurately Evaluating SNP Effects by Exploiting the Different Characteristics of Variants in Distinct Genomic Regions., , , , , and . PLoS Computational Biology, (2016)CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories., , , , , , , , , and 4 other author(s). Bioinformatics, 34 (20): 3586-3588 (2018)FireProt: web server for automated design of thermostable proteins., , , , , , , , and . Nucleic Acids Research, 45 (Webserver-Issue): W393-W399 (2017)