{"3210e1ffc832fafc1dca203bc6d8869dhermann":{"DOI":"10.1007/978-1-4842-7217-6","ISBN":"","ISSN":"","URL":"https://doi.org/10.1007%2F978-1-4842-7217-6","abstract":"","annote":"","author":[{"family":"Bhatti","given":"Jared"},{"family":"Corleissen","given":"Zachary Sarah"},{"family":"Lambourne","given":"Jen"},{"family":"Nunez","given":"David"},{"family":"Waterhouse","given":"Heidi"}],"citation-label":"bhatti2021developers","collection-editor":[],"collection-title":"","container-author":[],"container-title":"","documents":[],"edition":"","editor":[],"event-date":{"date-parts":[["2021"]],"literal":"2021"},"event-place":"","id":"3210e1ffc832fafc1dca203bc6d8869dhermann","interhash":"a3e47a18268aab24f08bfe75e91190cb","intrahash":"3210e1ffc832fafc1dca203bc6d8869d","issue":"","issued":{"date-parts":[["2021"]],"literal":"2021"},"keyword":"documentation workflow diss","misc":{"doi":"10.1007/978-1-4842-7217-6"},"note":"","number":"","page":"","page-first":"","publisher":"Apress","publisher-place":"","status":"","title":"Docs for Developers","type":"book","username":"hermann","version":"","volume":""},"456d6bdd185ffdbd5a0101a04e9d58dchermann":{"DOI":"","ISBN":"","ISSN":"","URL":"http://dblp.uni-trier.de/db/conf/kcap/kcap2017w.html#CarvalhoWGG17","abstract":"","annote":"","author":[{"family":"Carvalho","given":"Lucas A. 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Such provenance allows inspecting intermediate and final results, improves understanding, and permits replaying a workflow execution. Nevertheless, this approach does not provide any means for capturing and sharing the very valuable knowledge about the experimental equipment of a computational experiment, i.e., the execution environment in which the experiments are conducted. In this work, we propose a novel approach based on semantic vocabularies that describes the execution environment of scientific workflows, so as to conserve it. We define a process for documenting the workflow application and its related management system, as well as their dependencies. Then we apply this approach over three different real workflow applications running in three distinct scenarios, using public, private, and local Cloud platforms. In particular, we study one astronomy workflow and two life science workflows for genomic information analysis. Experimental results show that our approach can reproduce an equivalent execution environment of a predefined virtual machine image on all evaluated computing platforms.","annote":"","author":[{"family":"Santana-Perez","given":"Idafen"},{"family":"da Silva","given":"Rafael Ferreira"},{"family":"Rynge","given":"Mats"},{"family":"Deelman","given":"Ewa"},{"family":"Pérez-Hernández","given":"María S."},{"family":"Corcho","given":"Oscar"}],"citation-label":"SANTANAPEREZ2017354","collection-editor":[],"collection-title":"","container-author":[],"container-title":"Future Generation Computer Systems","documents":[],"edition":"","editor":[],"event-date":{"date-parts":[["2017"]],"literal":"2017"},"event-place":"","id":"0c5417ac76a0927bb4040198bb5ad0d6hermann","interhash":"0a245a2f3e07d4237f4673010f11f407","intrahash":"0c5417ac76a0927bb4040198bb5ad0d6","issue":"","issued":{"date-parts":[["2017"]],"literal":"2017"},"keyword":"workflow reproducibility metadaten","misc":{"issn":"0167-739X","doi":"https://doi.org/10.1016/j.future.2015.12.017"},"note":"","number":"","number-of-pages":"13","page":"354 - 367","page-first":"354","publisher":"","publisher-place":"","status":"","title":"Reproducibility of execution environments in computational science using Semantics and Clouds","type":"article-journal","username":"hermann","version":"","volume":"67"},"cb6c0ca6316c2d9804adeed71c8c71e4hermann":{"DOI":"","ISBN":"","ISSN":"","URL":"http://oa.upm.es/20401/","abstract":"A workflow-centric research object bundles a workflow, the provenance of the results obtained by its enactment, other digital objects that are relevant for the experiment (papers, datasets, etc.), and annotations that semantically describe all these objects. In this paper, we propose a model to specify workflow-centric research objects, and show how the model can be grounded using semantic technologies and existing vocabularies, in particular the Object Reuse and Exchange (ORE) model and the Annotation Ontology (AO).We describe the life-cycle of a research object, which resembles the life-cycle of a scienti?c experiment.","annote":"","author":[{"family":"Corcho","given":"Oscar"},{"family":"Verdejo","given":"Daniel Garijo"},{"family":"Belhajjame","given":"K."},{"family":"Zhao","given":"Jun"},{"family":"Missier","given":"P."},{"family":"Newman","given":"David"},{"family":"Palma","given":"R."},{"family":"Bechhofer","given":"S."},{"family":"Cuesta","given":"Esteban García"},{"family":"Gómez-Pérez","given":"José Manuel"},{"family":"Klyne","given":"Graham"},{"family":"Roos","given":"Marco"},{"family":"Ruiz","given":"José Enrique"},{"family":"Soiland-Reyes","given":"Stian"},{"family":"Verdes-Montenegro","given":"Lourdes"},{"family":"Roure","given":"D. 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